Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   KE639_RS27545 Genome accession   NZ_CP074111
Coordinates   5999968..6000747 (-) Length   259 a.a.
NCBI ID   WP_061442172.1    Uniprot ID   A0ABW8BKT2
Organism   Streptomyces sp. V17-9     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5994968..6005747
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KE639_RS27530 (KE639_05502) - 5995041..5996939 (+) 1899 WP_212731393.1 IucA/IucC family protein -
  KE639_RS27535 (KE639_05503) - 5997002..5997694 (+) 693 WP_212731394.1 GNAT family N-acetyltransferase -
  KE639_RS27540 (KE639_05504) - 5997861..5999879 (+) 2019 WP_212731395.1 ATP-dependent DNA helicase -
  KE639_RS27545 (KE639_05505) dinR/lexA 5999968..6000747 (-) 780 WP_061442172.1 transcriptional repressor LexA Regulator
  KE639_RS27550 (KE639_05506) nrdR 6001277..6001825 (+) 549 WP_125628514.1 transcriptional regulator NrdR -
  KE639_RS27555 (KE639_05507) - 6001991..6004888 (+) 2898 WP_102931387.1 vitamin B12-dependent ribonucleotide reductase -
  KE639_RS27560 (KE639_05508) - 6004965..6005498 (-) 534 WP_102931386.1 TerD family protein -

Sequence

Protein


Download         Length: 259 a.a.        Molecular weight: 27972.69 Da        Isoelectric Point: 7.0666

>NTDB_id=490640 KE639_RS27545 WP_061442172.1 5999968..6000747(-) (dinR/lexA) [Streptomyces sp. V17-9]
MTTTADSATITAQERPQGRPEPVHAMSDATNPEGHKRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQAASVQPTDTAGKPAASYVPLVGRIAAGGPILAEESVED
VFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNAAYEP
IPGDDATILGKVVAVLRRV

Nucleotide


Download         Length: 780 bp        

>NTDB_id=490640 KE639_RS27545 WP_061442172.1 5999968..6000747(-) (dinR/lexA) [Streptomyces sp. V17-9]
GTGACCACCACCGCCGACAGTGCCACCATCACTGCCCAGGAACGCCCCCAGGGCCGACCTGAGCCGGTGCACGCGATGAG
CGACGCCACGAATCCCGAGGGGCACAAGCGCTCCCTGCCGGGGCGACCTCCCGGCATCCGGGCGGACAGCTCGGGACTCA
CCGACCGCCAACGCCGGGTGATCGAGGTCATCCGCGACTCCGTGCAGCGGCGCGGGTACCCGCCGTCGATGCGGGAGATC
GGCCAGGCCGTCGGCCTCTCCAGCACCTCCTCCGTGGCACACCAGCTGATGGCTCTGGAGCGCAAGGGCTTCCTGCGCCG
GGACCCGCACCGCCCGCGCGCCTACGAGGTGCGTGGCTCCGACCAGGCCGCCTCGGTGCAGCCCACGGACACCGCCGGAA
AGCCGGCCGCGTCGTACGTGCCGCTCGTCGGGCGCATCGCCGCCGGTGGCCCGATCCTGGCCGAGGAGTCCGTCGAGGAC
GTCTTCCCGCTCCCCCGGCAGCTGGTCGGCGACGGTGAGCTGTTCGTGCTGAAGGTCGTCGGCGACTCGATGATCGAGGC
CGCGATCTGCGACGGGGACTGGGTCACGGTCCGCCGTCAGCCGGTCGCCGAGAACGGCGACATCGTGGCCGCGATGCTCG
ACGGCGAGGCCACCGTCAAGCGCTTCAAGCGCGAGGACGGCCACGTCTGGCTCCTCCCGCACAACGCGGCCTACGAGCCG
ATCCCCGGTGACGACGCGACCATCCTCGGCAAGGTGGTGGCCGTACTGCGTCGCGTCTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(141-253)

LexA DNA binding domain (LexA_DNA_bind)

(51-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.972

81.467

0.375