Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   KE639_RS11770 Genome accession   NZ_CP074111
Coordinates   2501006..2502934 (+) Length   642 a.a.
NCBI ID   WP_165285500.1    Uniprot ID   A0ABW8BGP8
Organism   Streptomyces sp. V17-9     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2496006..2507934
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KE639_RS11735 (KE639_02341) - 2496541..2496693 (+) 153 WP_164712968.1 hypothetical protein -
  KE639_RS11755 (KE639_02345) - 2497313..2497618 (+) 306 WP_164712967.1 YtxH domain-containing protein -
  KE639_RS11760 (KE639_02346) - 2497667..2499115 (+) 1449 WP_102931588.1 FGGY family carbohydrate kinase -
  KE639_RS11765 (KE639_02347) rcrP 2499273..2501006 (+) 1734 WP_212730087.1 ABC transporter ATP-binding protein Regulator
  KE639_RS11770 (KE639_02348) rcrQ 2501006..2502934 (+) 1929 WP_165285500.1 ABC transporter ATP-binding protein Regulator
  KE639_RS11775 (KE639_02349) - 2503051..2504252 (-) 1202 Protein_2340 RNA polymerase sigma factor -
  KE639_RS11780 - 2504404..2505058 (+) 655 Protein_2341 hypothetical protein -
  KE639_RS11785 (KE639_02351) - 2505055..2506056 (+) 1002 WP_212730088.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein -

Sequence

Protein


Download         Length: 642 a.a.        Molecular weight: 69567.85 Da        Isoelectric Point: 5.5586

>NTDB_id=490595 KE639_RS11770 WP_165285500.1 2501006..2502934(+) (rcrQ) [Streptomyces sp. V17-9]
MAGPAGRMMAGGGPDQRSMDFKGSSKRLVAQFRPERATLFTLLACVVVSVGLNVVGPKILGRATDLVFAGIVGRDMPSGA
TKEQVLDSMREHGDGNVADMLRSTDFTPGQGIDFGAVGEVLLLALATFAVAGLLMAVATRLVNRTVNRTMFRLREHVQTK
LSRLPLSYFDKRQRGEVLSRATNDIDNIQQTLQQSMGQLINSLLTIIGVLAMMFYVSWILALVALVTVPLSFVVATRVGK
RSQPQFVQQWRSTGALNAHIEEMYTGHALVKVFGRQEESAKQFAEQNDALYEAGFKAQFNSGIMQPLMMFVSNLNYVLVA
VVGGLRVASGQLSIGDVQAFIQYSRQFSMPLTQVASMANLVQSGVASAERIFELLDAEEQSTDPIPGARPEDLRGRVELE
HVSFRYDPEKPLIEDLSLKVEPGHTVAIVGPTGAGKTTLVNLLMRFYEVTGGRITLDGVDIAKMSRDELRAGIGMVLQDT
WLFGGTIAENIAYGASREVTRGEIEEAARAAHADRFVRTLPDGYDTVIDDEGTGVSAGEKQLITIARAFLSDPVILVLDE
ATSSVDTRTEVLIQKAMAKLAHGRTSFVIAHRLSTIRDADTILVMEDGAIVEQGAHAELLAADGAYARLYKAQFAEAVAE
VG

Nucleotide


Download         Length: 1929 bp        

>NTDB_id=490595 KE639_RS11770 WP_165285500.1 2501006..2502934(+) (rcrQ) [Streptomyces sp. V17-9]
ATGGCCGGGCCTGCGGGTCGCATGATGGCCGGGGGCGGCCCCGACCAGCGTTCGATGGACTTCAAGGGGTCGAGCAAACG
GCTCGTCGCCCAGTTCCGGCCGGAGCGGGCGACGCTGTTCACGCTGCTGGCCTGCGTGGTCGTCAGCGTCGGCCTCAACG
TGGTCGGGCCGAAGATCCTCGGCCGGGCCACCGACCTGGTCTTCGCGGGCATCGTCGGGCGGGACATGCCGTCCGGGGCC
ACGAAGGAGCAGGTCCTGGACTCCATGCGCGAGCACGGTGACGGCAACGTCGCCGACATGCTCCGCAGCACGGACTTCAC
CCCCGGCCAGGGCATCGACTTCGGCGCGGTGGGCGAGGTGCTGCTCCTGGCGCTGGCGACCTTCGCGGTGGCCGGCCTGC
TGATGGCGGTGGCGACGCGGCTGGTCAACCGCACGGTCAACCGGACGATGTTCCGGCTGCGCGAGCACGTGCAGACGAAG
CTGTCCCGGCTGCCGCTGTCCTACTTCGACAAGCGGCAGCGCGGCGAGGTGCTGAGCCGCGCGACCAACGACATCGACAA
CATCCAGCAGACGCTCCAGCAGTCGATGGGCCAGCTGATCAACTCGCTGCTCACCATCATCGGCGTGCTGGCGATGATGT
TCTACGTCTCCTGGATCCTGGCGCTGGTCGCCCTGGTGACCGTGCCGCTGTCCTTCGTGGTGGCCACGCGGGTGGGCAAG
CGGTCGCAGCCGCAGTTCGTGCAGCAGTGGCGCTCGACGGGCGCGCTGAACGCGCACATCGAGGAGATGTACACCGGGCA
CGCGCTGGTGAAGGTGTTCGGGCGGCAGGAGGAGTCCGCGAAGCAGTTCGCCGAGCAGAACGACGCGCTGTACGAGGCCG
GGTTCAAGGCGCAGTTCAACAGCGGGATCATGCAGCCGCTGATGATGTTCGTGTCCAACCTGAACTACGTGCTGGTCGCG
GTGGTCGGCGGTCTGCGGGTGGCCTCGGGCCAGCTGTCCATCGGCGACGTGCAGGCCTTCATCCAGTACTCCCGGCAGTT
CTCGATGCCGCTGACGCAGGTCGCGTCGATGGCGAACCTGGTGCAGTCGGGCGTGGCGTCGGCGGAGCGGATCTTCGAGC
TCCTGGACGCCGAGGAGCAGTCGACGGACCCGATCCCGGGCGCCCGCCCGGAGGACCTGCGCGGCCGGGTGGAGCTGGAG
CACGTCTCCTTCCGCTACGACCCGGAGAAGCCGCTGATCGAGGACCTGTCGCTGAAGGTGGAGCCGGGCCACACGGTCGC
CATCGTCGGACCGACGGGCGCGGGCAAGACGACCCTGGTCAACCTGCTGATGCGGTTCTACGAGGTGACCGGCGGGCGGA
TCACCCTGGACGGCGTCGACATCGCGAAGATGTCCCGGGACGAGCTGCGGGCCGGCATCGGCATGGTGCTCCAGGACACC
TGGCTGTTCGGCGGCACCATCGCGGAGAACATCGCGTACGGGGCCTCGCGGGAGGTCACCCGCGGGGAGATCGAGGAGGC
CGCGCGGGCCGCGCACGCCGACCGGTTCGTACGGACGCTGCCCGACGGCTACGACACGGTGATCGACGACGAGGGCACGG
GGGTGAGCGCGGGTGAGAAGCAGCTGATCACCATCGCGCGGGCGTTCCTGTCCGACCCGGTGATCCTCGTGCTGGACGAG
GCGACGTCGTCGGTGGACACGCGGACGGAGGTGCTGATCCAGAAGGCGATGGCGAAGCTGGCGCACGGGCGGACGTCGTT
CGTGATCGCGCACCGGCTGTCGACGATCCGGGACGCGGACACGATTCTGGTCATGGAGGACGGGGCGATCGTGGAGCAGG
GGGCGCACGCGGAGCTGCTGGCGGCGGATGGTGCGTACGCGCGGCTGTACAAGGCTCAGTTCGCGGAGGCTGTGGCTGAG
GTGGGGTAG

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(414-563)

ABC transporter transmembrane region (ABC_membrane)

(40-351)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

41.894

97.04

0.407