Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   KE639_RS11765 Genome accession   NZ_CP074111
Coordinates   2499273..2501006 (+) Length   577 a.a.
NCBI ID   WP_212730087.1    Uniprot ID   -
Organism   Streptomyces sp. V17-9     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2494273..2506006
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KE639_RS11730 (KE639_02340) - 2495055..2496473 (+) 1419 WP_212730086.1 GAF domain-containing protein -
  KE639_RS11735 (KE639_02341) - 2496541..2496693 (+) 153 WP_164712968.1 hypothetical protein -
  KE639_RS11755 (KE639_02345) - 2497313..2497618 (+) 306 WP_164712967.1 YtxH domain-containing protein -
  KE639_RS11760 (KE639_02346) - 2497667..2499115 (+) 1449 WP_102931588.1 FGGY family carbohydrate kinase -
  KE639_RS11765 (KE639_02347) rcrP 2499273..2501006 (+) 1734 WP_212730087.1 ABC transporter ATP-binding protein Regulator
  KE639_RS11770 (KE639_02348) rcrQ 2501006..2502934 (+) 1929 WP_165285500.1 ABC transporter ATP-binding protein Regulator
  KE639_RS11775 (KE639_02349) - 2503051..2504252 (-) 1202 Protein_2340 RNA polymerase sigma factor -
  KE639_RS11780 - 2504404..2505058 (+) 655 Protein_2341 hypothetical protein -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62558.79 Da        Isoelectric Point: 6.1941

>NTDB_id=490594 KE639_RS11765 WP_212730087.1 2499273..2501006(+) (rcrP) [Streptomyces sp. V17-9]
MLIRLLRTYLRPYKKPIALLVALQFLQTCASLYLPTLNADMIDNGVVEGDSGYILSYGALMIGISLAQVVCNIGAVFYGA
RTAAALGRDVRGAVFDRVQSFSAREVGHFGAPSLITRTTNDVQQVQMLALMSFTLMVSAPIMCVGGIVMALGLDVPLSGV
LLGVVPVLAICVTLIVRKLRPLFRKMQVRLDTVNRVLREQITGNRVIRAFVRDEYEQQRFRKANTELTEVSLGTGNLLAL
MFPVVMTVVNLSSIAVVWFGAHRIDSGGMQIGDLTAFLAYLMQIVMSVMMATFMFMMVPRAEVCAERIQEVLGTESSVVP
PVAPVTELRRHGHLEIREAGFRYPGAEEPVLRNIGLVAKPGETTAVIGSTGSGKSTLLGLVPRLFDATDGEVLVNGVDVR
TVDPKTLAKVVSLVPQKPYLFAGTVATNLRYGNPDATDEELWHALAVAQAKEFVSELEGGLDAPISQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRAALAQETAEATVVIVAQRVATIRDADRIVVLDEGRVVGVGRHHELMADN
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=490594 KE639_RS11765 WP_212730087.1 2499273..2501006(+) (rcrP) [Streptomyces sp. V17-9]
GTGCTCATACGACTACTGCGGACCTATCTCAGGCCCTACAAGAAACCCATCGCCCTGCTGGTGGCGCTGCAGTTCCTGCA
GACCTGCGCCTCCCTCTACCTGCCGACCCTGAACGCGGACATGATCGACAACGGTGTCGTGGAAGGTGACTCGGGCTACA
TCCTGAGCTACGGCGCCCTGATGATCGGCATCTCGCTGGCCCAGGTGGTCTGCAACATCGGCGCCGTCTTCTACGGCGCG
CGCACCGCCGCCGCGCTCGGCCGGGACGTGCGCGGTGCCGTCTTCGACCGGGTGCAGTCCTTCTCGGCGCGCGAGGTGGG
CCACTTCGGCGCGCCCTCGCTGATCACGCGGACCACCAACGACGTGCAGCAGGTCCAGATGCTGGCCCTGATGTCGTTCA
CGCTGATGGTGTCGGCGCCGATCATGTGCGTGGGCGGCATCGTGATGGCGCTCGGCCTGGACGTGCCGCTGTCCGGGGTG
CTGCTCGGGGTCGTGCCGGTGCTGGCGATCTGCGTCACGCTGATCGTGCGGAAGCTGCGCCCGCTGTTCCGGAAGATGCA
GGTGCGCCTGGACACGGTGAACCGGGTGCTGCGCGAGCAGATCACCGGCAACCGCGTCATCCGCGCCTTCGTGCGCGACG
AGTACGAGCAGCAGCGTTTCCGGAAGGCCAACACCGAGCTGACCGAGGTGTCCCTCGGCACCGGCAACCTGCTCGCGCTG
ATGTTCCCGGTGGTCATGACGGTGGTGAACCTGTCGTCGATCGCGGTGGTCTGGTTCGGCGCCCACCGGATCGACAGCGG
CGGGATGCAGATCGGCGACCTGACCGCGTTCCTCGCCTACCTCATGCAGATCGTCATGTCCGTGATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGCGCGGAGGTGTGCGCCGAGCGCATCCAGGAGGTCCTGGGGACCGAGAGCAGTGTGGTGCCA
CCGGTGGCGCCGGTCACCGAGCTGCGCCGGCACGGGCACCTGGAGATCCGGGAGGCGGGCTTCCGCTACCCGGGTGCCGA
GGAGCCGGTGCTCAGGAACATCGGCCTGGTGGCCAAGCCGGGTGAGACGACCGCCGTCATCGGCTCGACCGGCAGCGGCA
AGTCGACGCTGCTGGGCCTGGTCCCCCGGCTCTTCGACGCCACCGACGGGGAGGTCCTGGTCAACGGCGTCGACGTGCGC
ACCGTGGACCCGAAGACGCTGGCCAAGGTGGTGAGCCTGGTGCCGCAGAAGCCGTACCTCTTCGCCGGCACCGTCGCGAC
CAACCTGCGGTACGGCAATCCGGACGCCACCGACGAGGAGCTGTGGCACGCGCTGGCGGTGGCGCAGGCCAAGGAGTTCG
TCTCCGAGCTGGAGGGCGGGCTCGACGCGCCGATCTCCCAGGGCGGCACCAACGTGTCCGGCGGTCAGCGCCAGCGGCTC
GCCATCGCGCGGACGCTGGTCCAGCGCCCGGAGATCTACCTCTTCGACGACTCCTTCTCCGCCCTCGACTACGCCACCGA
CGCGGCGCTGCGGGCCGCGCTGGCCCAGGAGACCGCCGAGGCGACGGTGGTCATCGTGGCGCAGCGGGTGGCGACCATCC
GGGACGCGGACCGGATCGTCGTGCTGGACGAGGGGCGGGTGGTCGGCGTGGGCCGGCACCACGAACTGATGGCGGACAAC
GAGACGTACCGGGAGATCGTGCTCTCCCAGCTGACGGAAGCGGAGGCTGCCTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(351-498)

ABC transporter transmembrane region (ABC_membrane)

(19-288)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.076

97.574

0.381