Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ICN73_RS08765 Genome accession   NZ_CP062699
Coordinates   1937532..1937933 (+) Length   133 a.a.
NCBI ID   WP_003249324.1    Uniprot ID   A0AAD2W8A3
Organism   Pseudomonas taiwanensis strain WRS8     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1932532..1942933
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ICN73_RS08735 (ICN73_08735) - 1932599..1933603 (-) 1005 WP_003249311.1 aspartate carbamoyltransferase catalytic subunit -
  ICN73_RS08740 (ICN73_08740) pyrR 1933616..1934134 (-) 519 WP_003249313.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ICN73_RS08745 (ICN73_08745) ruvX 1934184..1934609 (-) 426 WP_003249316.1 Holliday junction resolvase RuvX -
  ICN73_RS08750 (ICN73_08750) - 1934609..1935178 (-) 570 WP_003249318.1 YqgE/AlgH family protein -
  ICN73_RS08755 (ICN73_08755) - 1935343..1936248 (-) 906 WP_192907640.1 energy transducer TonB -
  ICN73_RS08760 (ICN73_08760) gshB 1936340..1937293 (-) 954 WP_003249322.1 glutathione synthase -
  ICN73_RS08765 (ICN73_08765) pilG 1937532..1937933 (+) 402 WP_003249324.1 response regulator Regulator
  ICN73_RS08770 (ICN73_08770) pilH 1937981..1938346 (+) 366 WP_014592657.1 twitching motility response regulator PilH -
  ICN73_RS08775 (ICN73_08775) - 1938343..1938897 (+) 555 WP_014754673.1 chemotaxis protein CheW -
  ICN73_RS08780 (ICN73_08780) - 1938945..1940969 (+) 2025 WP_230623075.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14632.88 Da        Isoelectric Point: 6.4772

>NTDB_id=490562 ICN73_RS08765 WP_003249324.1 1937532..1937933(+) (pilG) [Pseudomonas taiwanensis strain WRS8]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHQPSIIFVDVLMPRLDGYQTCAVIKHNSAFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFATPQQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=490562 ICN73_RS08765 WP_003249324.1 1937532..1937933(+) (pilG) [Pseudomonas taiwanensis strain WRS8]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCCCGCACGATCCGCCGCACCGCGCAGATGTTGCTCGGTGAAGC
GGGCTGCGAGGTAATCACCGCCAGCGATGGCTTCGATGCCCTGGCCAAGATCGTCGACCATCAGCCCAGCATCATTTTTG
TCGATGTGCTGATGCCACGCCTGGACGGCTACCAGACCTGCGCGGTAATCAAGCACAACAGTGCCTTCAAGGACACCCCG
GTTATCCTGCTGTCGTCCCGCGATGGGCTGTTCGACAAGGCCCGCGGCCGGGTGGTCGGTTCCGATCAGTTCCTGACCAA
ACCGTTCAGCAAGGAAGAACTGCTCGATGCGATCCGCGCCCATGTGCCCGGGTTTGCCACACCTCAACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70

90.226

0.632