Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   IHV08_RS07755 Genome accession   NZ_CP062497
Coordinates   1469521..1469985 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain CV16     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1464521..1474985
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IHV08_RS07735 (IHV08_07735) kinA 1464987..1466807 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  IHV08_RS07740 (IHV08_07740) dapX 1466818..1467999 (-) 1182 WP_181217034.1 aminotransferase A -
  IHV08_RS07745 (IHV08_07745) - 1468201..1468362 (-) 162 WP_003245246.1 hypothetical protein -
  IHV08_RS07750 (IHV08_07750) cheV 1468566..1469477 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  IHV08_RS07755 (IHV08_07755) kre 1469521..1469985 (-) 465 WP_003232406.1 YkyB family protein Regulator
  IHV08_RS07760 (IHV08_07760) ykuC 1470111..1471403 (-) 1293 WP_014479656.1 MFS transporter -
  IHV08_RS07765 (IHV08_07765) ltdD 1471479..1471973 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  IHV08_RS07770 (IHV08_07770) ppeE 1472030..1472890 (-) 861 WP_181217035.1 metallophosphoesterase -
  IHV08_RS07775 (IHV08_07775) fadH 1473033..1473797 (+) 765 WP_192858391.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=490438 IHV08_RS07755 WP_003232406.1 1469521..1469985(-) (kre) [Bacillus subtilis strain CV16]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=490438 IHV08_RS07755 WP_003232406.1 1469521..1469985(-) (kre) [Bacillus subtilis strain CV16]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1