Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   IHV08_RS06390 Genome accession   NZ_CP062497
Coordinates   1222397..1223053 (+) Length   218 a.a.
NCBI ID   WP_003232942.1    Uniprot ID   A0AAQ3ENL6
Organism   Bacillus subtilis strain CV16     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1217397..1228053
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IHV08_RS06360 (IHV08_06360) oppF 1217862..1218779 (+) 918 WP_003245567.1 oligopeptide ABC transporter ATP-binding protein OppF -
  IHV08_RS06365 (IHV08_06365) yjbB 1218886..1220103 (+) 1218 WP_167408195.1 MFS transporter -
  IHV08_RS06370 (IHV08_06370) yjbC 1220267..1220845 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  IHV08_RS06375 (IHV08_06375) spx 1221026..1221421 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  IHV08_RS06380 (IHV08_06380) yjbE 1221464..1222120 (-) 657 WP_003232944.1 TerC family protein -
  IHV08_RS06385 (IHV08_06385) - 1222290..1222430 (+) 141 WP_119122854.1 hypothetical protein -
  IHV08_RS06390 (IHV08_06390) mecA 1222397..1223053 (+) 657 WP_003232942.1 adaptor protein MecA Regulator
  IHV08_RS06395 (IHV08_06395) - 1223048..1223170 (-) 123 WP_021479547.1 hypothetical protein -
  IHV08_RS06400 (IHV08_06400) coiA 1223214..1224365 (+) 1152 WP_192858359.1 competence protein CoiA Machinery gene
  IHV08_RS06405 (IHV08_06405) pepF 1224595..1226424 (+) 1830 WP_167408054.1 oligoendopeptidase F -
  IHV08_RS06410 (IHV08_06410) - 1226462..1226629 (-) 168 WP_003244944.1 hypothetical protein -
  IHV08_RS06415 (IHV08_06415) spxH 1226943..1227842 (-) 900 WP_024573348.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25762.62 Da        Isoelectric Point: 4.0841

>NTDB_id=490433 IHV08_RS06390 WP_003232942.1 1222397..1223053(+) (mecA) [Bacillus subtilis strain CV16]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSNLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYANESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=490433 IHV08_RS06390 WP_003232942.1 1222397..1223053(+) (mecA) [Bacillus subtilis strain CV16]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAATTTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAA
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

99.083

100

0.991