Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   IHV08_RS06280 Genome accession   NZ_CP062497
Coordinates   1200918..1201109 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain CV16     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1195918..1206109
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IHV08_RS06250 (IHV08_06250) argF 1196780..1197739 (+) 960 WP_192858357.1 ornithine carbamoyltransferase -
  IHV08_RS06255 (IHV08_06255) yjzC 1197825..1198004 (+) 180 WP_003245356.1 YjzC family protein -
  IHV08_RS06260 (IHV08_06260) yjzD 1198051..1198236 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  IHV08_RS06265 (IHV08_06265) - 1198486..1199220 (+) 735 WP_003245223.1 hypothetical protein -
  IHV08_RS06270 (IHV08_06270) - 1199302..1199859 (+) 558 WP_014479435.1 hypothetical protein -
  IHV08_RS06275 (IHV08_06275) med 1199950..1200903 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  IHV08_RS06280 (IHV08_06280) comZ 1200918..1201109 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  IHV08_RS06285 (IHV08_06285) yjzB 1201139..1201378 (-) 240 WP_003232972.1 spore coat protein YjzB -
  IHV08_RS06290 (IHV08_06290) fabH 1201543..1202481 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  IHV08_RS06295 (IHV08_06295) fabF 1202504..1203745 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  IHV08_RS06300 (IHV08_06300) yjaZ 1203821..1204606 (+) 786 WP_032721346.1 DUF2268 domain-containing protein -
  IHV08_RS06305 (IHV08_06305) appD 1204798..1205784 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=490430 IHV08_RS06280 WP_003224559.1 1200918..1201109(+) (comZ) [Bacillus subtilis strain CV16]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=490430 IHV08_RS06280 WP_003224559.1 1200918..1201109(+) (comZ) [Bacillus subtilis strain CV16]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATACAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1