Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   IHV08_RS04755 Genome accession   NZ_CP062497
Coordinates   919011..919805 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain CV16     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 914011..924805
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IHV08_RS04725 (IHV08_04725) sxzA 914850..915881 (+) 1032 WP_101501786.1 iron ABC transporter permease -
  IHV08_RS04730 (IHV08_04730) yfhB 915996..916877 (+) 882 WP_192858326.1 PhzF family phenazine biosynthesis isomerase -
  IHV08_RS04735 (IHV08_04735) yfhC 916965..917549 (+) 585 WP_032723010.1 nitroreductase -
  IHV08_RS04740 (IHV08_04740) yfhD 917588..917779 (-) 192 WP_003233561.1 YfhD family protein -
  IHV08_RS04745 (IHV08_04745) yfhE 917846..917956 (-) 111 WP_003223230.1 YfhE family protein -
  IHV08_RS04750 (IHV08_04750) yfhF 918011..918922 (-) 912 WP_044052591.1 TIGR01777 family oxidoreductase -
  IHV08_RS04755 (IHV08_04755) recX 919011..919805 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  IHV08_RS04760 (IHV08_04760) yfhH 919807..920121 (+) 315 WP_003244592.1 YfhH family protein -
  IHV08_RS04765 (IHV08_04765) yfhI 920264..921457 (+) 1194 WP_192858327.1 MFS transporter -
  IHV08_RS04770 (IHV08_04770) sspK 921489..921641 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  IHV08_RS04775 (IHV08_04775) yfhJ 921766..922035 (+) 270 WP_003243789.1 YfhJ family protein -
  IHV08_RS04780 (IHV08_04780) yfhK 922180..922698 (+) 519 WP_192858328.1 SH3 domain-containing protein -
  IHV08_RS04785 (IHV08_04785) spdL 922783..923115 (+) 333 WP_192858329.1 SdpC immunity protein SpdL -
  IHV08_RS04790 (IHV08_04790) ephM 923102..923962 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=490421 IHV08_RS04755 WP_003243354.1 919011..919805(+) (recX) [Bacillus subtilis strain CV16]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=490421 IHV08_RS04755 WP_003243354.1 919011..919805(+) (recX) [Bacillus subtilis strain CV16]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATATGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1