Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   IF720_RS14165 Genome accession   NZ_CP062415
Coordinates   2853463..2854179 (-) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain NAS_AN_150     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2848463..2859179
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IF720_RS14150 (IF720_14090) - 2849550..2850500 (+) 951 WP_000790325.1 LacI family DNA-binding transcriptional regulator -
  IF720_RS14155 (IF720_14095) - 2850649..2852133 (+) 1485 WP_001791588.1 sucrose-6-phosphate hydrolase -
  IF720_RS14160 (IF720_14100) - 2852130..2853089 (+) 960 WP_001253292.1 carbohydrate kinase -
  IF720_RS14165 (IF720_14105) agrA 2853463..2854179 (-) 717 WP_000688492.1 LytTR family DNA-binding domain-containing protein Regulator
  IF720_RS14170 (IF720_14110) - 2854198..2855490 (-) 1293 WP_240111987.1 GHKL domain-containing protein -
  IF720_RS14175 (IF720_14115) - 2855515..2855655 (-) 141 WP_000735197.1 cyclic lactone autoinducer peptide -
  IF720_RS14180 (IF720_14120) - 2855659..2856222 (-) 564 WP_001105709.1 accessory gene regulator AgrB -
  IF720_RS14185 hld 2856512..2856592 (+) 81 WP_000046022.1 delta-hemolysin -
  IF720_RS14190 (IF720_14130) - 2857195..2857980 (-) 786 WP_240111988.1 carbon-nitrogen family hydrolase -
  IF720_RS14195 (IF720_14135) - 2858341..2858967 (-) 627 WP_000522388.1 nitroreductase family protein -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=489889 IF720_RS14165 WP_000688492.1 2853463..2854179(-) (agrA) [Staphylococcus aureus strain NAS_AN_150]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=489889 IF720_RS14165 WP_000688492.1 2853463..2854179(-) (agrA) [Staphylococcus aureus strain NAS_AN_150]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATCAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACGTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTAT
TATCAAAAGATAATAGCGTTGAAACGATTGAGTTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTCAGATGTCATAATAGCTTTGTCGTCAATCGTCATAATATCGAATCTATTG
ATTCGAAAGAGCGTATTGTTTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1