Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   BSA_RS06280 Genome accession   NC_021485
Coordinates   1229575..1230057 (-) Length   160 a.a.
NCBI ID   WP_000163512.1    Uniprot ID   Q8DZB3
Organism   Streptococcus agalactiae 09mas018883     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1224575..1235057
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSA_RS06260 (BSA_12710) alsS 1224834..1226516 (-) 1683 WP_000140344.1 acetolactate synthase AlsS -
  BSA_RS06265 (BSA_12720) - 1226626..1227852 (-) 1227 WP_000934868.1 hypothetical protein -
  BSA_RS06270 (BSA_12730) - 1227842..1229032 (-) 1191 WP_001081534.1 AI-2E family transporter -
  BSA_RS06275 (BSA_12740) - 1229124..1229585 (-) 462 WP_000796053.1 NUDIX hydrolase -
  BSA_RS06280 (BSA_12750) mutX 1229575..1230057 (-) 483 WP_000163512.1 8-oxo-dGTP diphosphatase Machinery gene
  BSA_RS06285 (BSA_12760) hylB 1230275..1233493 (+) 3219 WP_000403414.1 hyaluronate lyase -
  BSA_RS06290 (BSA_12770) rfbB 1233545..1234591 (-) 1047 WP_000134275.1 dTDP-glucose 4,6-dehydratase -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18837.23 Da        Isoelectric Point: 4.5116

>NTDB_id=48987 BSA_RS06280 WP_000163512.1 1229575..1230057(-) (mutX) [Streptococcus agalactiae 09mas018883]
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=48987 BSA_RS06280 WP_000163512.1 1229575..1230057(-) (mutX) [Streptococcus agalactiae 09mas018883]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGCACCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAGTGGATCTCGGTAGGCGGTAAACTGGAGGCAGGTGAAACTCCTGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACAGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACTTT
AGAATGGGTACCATATGATCAAGTTCTCTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DZB3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.698

99.375

0.712

Multiple sequence alignment