Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | IF751_RS13400 | Genome accession | NZ_CP062407 |
| Coordinates | 2740673..2740972 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain NAS_NP_181 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2735673..2745972
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IF751_RS13360 (IF751_13270) | - | 2735734..2735937 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| IF751_RS13365 (IF751_13275) | - | 2735934..2736920 (+) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| IF751_RS13370 (IF751_13280) | - | 2736920..2737249 (+) | 330 | WP_020977297.1 | MTH1187 family thiamine-binding protein | - |
| IF751_RS13375 (IF751_13285) | - | 2737246..2737869 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| IF751_RS13380 (IF751_13290) | comGA | 2737921..2738895 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| IF751_RS13385 (IF751_13295) | comGB | 2738867..2739937 (+) | 1071 | WP_000776407.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| IF751_RS13390 (IF751_13300) | comGC | 2739951..2740262 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| IF751_RS13395 (IF751_13305) | comGD | 2740240..2740686 (+) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| IF751_RS13400 (IF751_13310) | comGE | 2740673..2740972 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| IF751_RS13405 (IF751_13315) | comGF | 2740890..2741387 (+) | 498 | WP_020977296.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| IF751_RS13410 (IF751_13320) | - | 2741484..2741630 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| IF751_RS13415 (IF751_13325) | - | 2741620..2742144 (+) | 525 | WP_020977295.1 | shikimate kinase | - |
| IF751_RS13420 (IF751_13330) | gcvT | 2742303..2743394 (+) | 1092 | WP_020977294.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| IF751_RS13425 (IF751_13335) | gcvPA | 2743414..2744760 (+) | 1347 | WP_020977293.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=489546 IF751_RS13400 WP_000844413.1 2740673..2740972(+) (comGE) [Staphylococcus aureus strain NAS_NP_181]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=489546 IF751_RS13400 WP_000844413.1 2740673..2740972(+) (comGE) [Staphylococcus aureus strain NAS_NP_181]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAGCTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAGCTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |