Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   SGGB_RS11695 Genome accession   NC_017576
Coordinates   2361464..2362240 (+) Length   258 a.a.
NCBI ID   WP_009855222.1    Uniprot ID   A0AA36K0A4
Organism   Streptococcus gallolyticus subsp. gallolyticus ATCC 43143     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2356464..2367240
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGGB_RS11685 (SGGB_2293) rlmH 2359439..2359918 (-) 480 WP_009855220.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SGGB_RS11690 (SGGB_2294) htrA 2360129..2361394 (+) 1266 WP_013643604.1 S1C family serine protease Regulator
  SGGB_RS11695 (SGGB_2295) spo0J 2361464..2362240 (+) 777 WP_009855222.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 29712.54 Da        Isoelectric Point: 9.7762

>NTDB_id=48943 SGGB_RS11695 WP_009855222.1 2361464..2362240(+) (spo0J) [Streptococcus gallolyticus subsp. gallolyticus ATCC 43143]
MPETLILIKIENISPNPYQPRLEFKQEELEELARSIKTNGLIQPIIVRESTVFGYELIAGERRLRASKMAGLTEIPAIIK
NISNQESMQLAIVENLQRSDLNPIEEAKAYQQLLEKNQMTHEELAQFMGKSRPYITNCLRLLNLPKSLSDAVEKGELSQG
HARVLLTLKNAEEQEKWYQKILTEDISVRKLEHLLKPAKKKKNRPKKKDIFIRNQEEELTKQLGLPVKIIVSKTGTKGEV
SLHFQSEEDLNRIINKLK

Nucleotide


Download         Length: 777 bp        

>NTDB_id=48943 SGGB_RS11695 WP_009855222.1 2361464..2362240(+) (spo0J) [Streptococcus gallolyticus subsp. gallolyticus ATCC 43143]
ATGCCTGAAACACTCATATTAATCAAAATTGAAAATATCTCACCTAATCCCTACCAACCCCGTTTAGAATTTAAACAAGA
AGAGCTAGAAGAACTAGCACGTTCGATTAAAACTAATGGGCTTATTCAGCCGATTATCGTCCGAGAATCAACTGTCTTTG
GTTATGAGCTTATTGCCGGTGAAAGACGTCTAAGAGCCTCAAAAATGGCAGGTTTAACCGAAATTCCTGCTATCATAAAA
AATATCTCCAATCAGGAGAGCATGCAGCTGGCTATCGTTGAAAATTTGCAACGTTCTGATTTAAATCCAATCGAAGAAGC
AAAAGCTTACCAGCAACTTCTGGAAAAAAATCAAATGACCCATGAAGAATTAGCACAATTTATGGGAAAATCTCGCCCCT
ACATTACCAATTGCCTCAGATTACTTAACCTTCCTAAAAGTCTCTCTGATGCCGTTGAAAAAGGTGAGCTGTCTCAAGGA
CACGCGCGTGTTCTTTTAACCCTTAAAAATGCTGAAGAACAAGAAAAGTGGTATCAAAAAATTCTGACAGAGGATATTAG
CGTTAGAAAACTTGAACATTTACTAAAACCTGCTAAAAAGAAAAAAAATCGTCCCAAAAAGAAAGATATTTTCATTCGAA
ATCAAGAAGAAGAATTGACCAAACAGTTAGGACTTCCTGTTAAAATTATCGTCTCTAAAACTGGCACAAAAGGAGAGGTG
AGTTTACATTTTCAATCTGAAGAAGACTTAAACAGAATTATCAACAAGCTAAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(149-196)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

59.533

99.612

0.593

Multiple sequence alignment