Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | SGGB_RS03550 | Genome accession | NC_017576 |
| Coordinates | 670226..672028 (+) | Length | 600 a.a. |
| NCBI ID | WP_012961672.1 | Uniprot ID | - |
| Organism | Streptococcus gallolyticus subsp. gallolyticus ATCC 43143 | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 665226..677028
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SGGB_RS03525 (SGGB_0646) | queA | 665882..666910 (-) | 1029 | WP_009853772.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
| SGGB_RS03530 (SGGB_0647) | - | 667086..667586 (+) | 501 | WP_009853773.1 | VIT1/CCC1 transporter family protein | - |
| SGGB_RS03535 (SGGB_0648) | nagB | 667715..668419 (+) | 705 | WP_013642867.1 | glucosamine-6-phosphate deaminase | - |
| SGGB_RS03540 (SGGB_0649) | - | 668495..669211 (+) | 717 | WP_009853775.1 | pseudouridine synthase | - |
| SGGB_RS03545 (SGGB_0650) | - | 669265..670236 (+) | 972 | WP_012961671.1 | competence protein CoiA | - |
| SGGB_RS03550 (SGGB_0651) | pepF | 670226..672028 (+) | 1803 | WP_012961672.1 | oligoendopeptidase F | Regulator |
| SGGB_RS03555 (SGGB_0652) | - | 672102..672620 (+) | 519 | WP_012961673.1 | GNAT family N-acetyltransferase | - |
| SGGB_RS03560 (SGGB_0653) | - | 672642..673253 (+) | 612 | WP_012961674.1 | HAD-IA family hydrolase | - |
| SGGB_RS03565 (SGGB_0654) | - | 673307..674008 (+) | 702 | WP_009853780.1 | O-methyltransferase | - |
| SGGB_RS03570 (SGGB_0655) | - | 674077..675186 (+) | 1110 | WP_012961675.1 | peptidyl-prolyl cis-trans isomerase | - |
Sequence
Protein
Download Length: 600 a.a. Molecular weight: 68884.91 Da Isoelectric Point: 4.5967
>NTDB_id=48912 SGGB_RS03550 WP_012961672.1 670226..672028(+) (pepF) [Streptococcus gallolyticus subsp. gallolyticus ATCC 43143]
MSDNRSHIDEKYQWDLSTVFATDDAWEAELASLDSDLENAKAYKGHLTALSNDLLAITESYLALSRRLEKLYVYASMKND
QDTTVAKYQEYQAKATAIYAKFSEIFAFYEPELMQLSKEAFEDFVAETPALSAYAHFFEQLFKRQPHVLSQAEEELLAGA
QEIFGAAGETFGLLDNADIIFPIVLDDEGKEIQLTHGNFISLLESKNRDVRKEAYQALYATYEQFQHTYAKTLQTNVKVH
NYEARVHHFKSAREAALSANFIPESVYDTLIETVNANLPLLHRYVELRKKILKLDDLKMYDIHTPLSEMDMSFTYEEALA
KAEDVLAVFGKEYSERVHRAFTERWIDVHVNKGKRSGAYSGGSYDTNAFMLLNWQDTLDNLFTLVHETGHSLHSTFTREN
QPYVYGDYSIFLAEIASTTNENILTETLLKEVDDDKARFAILNHYLDGFKSTIFRQAQFAEFEDIIHKADQAGEVLTSDY
LNQLYADLNEKYYGLSKADNPEIQYEWARIPHFYYNYYVYQYATGFAAASYLADKVVHGTQADIDRYLDYLKAGNSDYPL
NVIKKAGVDMTTSAYLDAAFRIFEERLDELEALIEKGAHL
MSDNRSHIDEKYQWDLSTVFATDDAWEAELASLDSDLENAKAYKGHLTALSNDLLAITESYLALSRRLEKLYVYASMKND
QDTTVAKYQEYQAKATAIYAKFSEIFAFYEPELMQLSKEAFEDFVAETPALSAYAHFFEQLFKRQPHVLSQAEEELLAGA
QEIFGAAGETFGLLDNADIIFPIVLDDEGKEIQLTHGNFISLLESKNRDVRKEAYQALYATYEQFQHTYAKTLQTNVKVH
NYEARVHHFKSAREAALSANFIPESVYDTLIETVNANLPLLHRYVELRKKILKLDDLKMYDIHTPLSEMDMSFTYEEALA
KAEDVLAVFGKEYSERVHRAFTERWIDVHVNKGKRSGAYSGGSYDTNAFMLLNWQDTLDNLFTLVHETGHSLHSTFTREN
QPYVYGDYSIFLAEIASTTNENILTETLLKEVDDDKARFAILNHYLDGFKSTIFRQAQFAEFEDIIHKADQAGEVLTSDY
LNQLYADLNEKYYGLSKADNPEIQYEWARIPHFYYNYYVYQYATGFAAASYLADKVVHGTQADIDRYLDYLKAGNSDYPL
NVIKKAGVDMTTSAYLDAAFRIFEERLDELEALIEKGAHL
Nucleotide
Download Length: 1803 bp
>NTDB_id=48912 SGGB_RS03550 WP_012961672.1 670226..672028(+) (pepF) [Streptococcus gallolyticus subsp. gallolyticus ATCC 43143]
ATGTCAGATAATCGTAGTCATATTGATGAAAAATACCAATGGGATTTAAGCACAGTTTTTGCCACAGATGATGCTTGGGA
AGCGGAGCTGGCTAGTCTTGATAGTGATTTAGAAAATGCTAAAGCTTACAAAGGGCATTTGACAGCGTTAAGTAATGATT
TGCTTGCTATTACGGAAAGTTACCTTGCCTTGTCGCGTCGTTTGGAGAAACTTTATGTTTATGCTTCAATGAAAAACGAC
CAAGATACAACAGTAGCCAAATATCAAGAATACCAAGCTAAAGCAACAGCAATCTATGCCAAGTTTAGTGAAATTTTTGC
TTTTTACGAACCTGAATTAATGCAATTGTCTAAAGAAGCTTTTGAGGATTTCGTGGCAGAAACACCAGCTTTATCTGCTT
ATGCACATTTCTTTGAGCAACTTTTCAAACGTCAACCGCATGTTTTGTCACAGGCTGAGGAAGAATTGTTAGCAGGTGCG
CAAGAAATTTTTGGAGCTGCAGGAGAAACATTTGGGCTTTTGGATAATGCTGACATCATTTTTCCAATCGTTCTAGATGA
TGAGGGCAAAGAAATTCAGCTAACGCATGGTAATTTCATTAGCTTGTTAGAATCAAAAAATCGTGATGTCCGCAAAGAAG
CTTACCAAGCTTTGTATGCAACTTATGAACAATTCCAACACACTTATGCGAAAACCTTGCAAACCAATGTCAAAGTGCAT
AACTATGAAGCGCGTGTTCATCATTTTAAATCAGCGCGTGAGGCAGCGCTTTCGGCTAATTTTATTCCAGAATCTGTTTA
TGATACCTTGATTGAAACGGTCAATGCTAACCTGCCTTTGCTTCATCGCTACGTGGAACTTCGCAAGAAAATCCTTAAAC
TGGATGATTTGAAAATGTACGATATTCATACGCCACTTTCTGAAATGGATATGAGTTTTACCTATGAAGAAGCTTTGGCA
AAAGCAGAAGATGTCTTGGCTGTTTTTGGCAAAGAATATTCTGAGCGTGTTCATCGTGCTTTTACAGAACGCTGGATTGA
CGTCCATGTCAATAAAGGCAAACGCTCTGGTGCCTACTCTGGTGGTTCGTATGATACCAATGCTTTCATGCTGTTAAATT
GGCAAGATACCTTGGATAATTTGTTTACCTTAGTTCACGAAACGGGGCACAGCCTGCATTCGACATTTACACGTGAAAAT
CAACCCTATGTTTATGGAGATTATAGTATTTTTTTGGCAGAAATTGCTTCAACAACTAATGAAAATATTTTGACAGAAAC
ACTTTTGAAAGAAGTTGATGATGACAAAGCACGCTTTGCAATTTTGAATCATTATCTTGATGGCTTCAAGAGCACCATTT
TCCGTCAAGCACAATTTGCAGAATTTGAAGATATCATTCATAAGGCAGACCAAGCTGGAGAAGTGTTGACGAGTGATTAC
CTCAACCAACTTTATGCCGACTTAAACGAGAAATATTATGGACTCAGCAAAGCAGACAACCCAGAAATCCAATACGAATG
GGCACGCATTCCGCATTTCTACTACAATTACTATGTTTACCAATACGCCACAGGATTTGCGGCAGCTAGTTATTTAGCTG
ATAAGGTTGTTCACGGTACACAAGCTGATATTGACCGCTACCTTGATTATCTGAAAGCAGGTAATTCTGATTATCCGCTT
AATGTGATTAAAAAAGCTGGTGTGGATATGACAACAAGTGCTTATCTAGACGCTGCTTTCCGAATTTTCGAGGAACGCTT
GGATGAGTTGGAAGCTTTAATTGAAAAAGGAGCACATCTATAA
ATGTCAGATAATCGTAGTCATATTGATGAAAAATACCAATGGGATTTAAGCACAGTTTTTGCCACAGATGATGCTTGGGA
AGCGGAGCTGGCTAGTCTTGATAGTGATTTAGAAAATGCTAAAGCTTACAAAGGGCATTTGACAGCGTTAAGTAATGATT
TGCTTGCTATTACGGAAAGTTACCTTGCCTTGTCGCGTCGTTTGGAGAAACTTTATGTTTATGCTTCAATGAAAAACGAC
CAAGATACAACAGTAGCCAAATATCAAGAATACCAAGCTAAAGCAACAGCAATCTATGCCAAGTTTAGTGAAATTTTTGC
TTTTTACGAACCTGAATTAATGCAATTGTCTAAAGAAGCTTTTGAGGATTTCGTGGCAGAAACACCAGCTTTATCTGCTT
ATGCACATTTCTTTGAGCAACTTTTCAAACGTCAACCGCATGTTTTGTCACAGGCTGAGGAAGAATTGTTAGCAGGTGCG
CAAGAAATTTTTGGAGCTGCAGGAGAAACATTTGGGCTTTTGGATAATGCTGACATCATTTTTCCAATCGTTCTAGATGA
TGAGGGCAAAGAAATTCAGCTAACGCATGGTAATTTCATTAGCTTGTTAGAATCAAAAAATCGTGATGTCCGCAAAGAAG
CTTACCAAGCTTTGTATGCAACTTATGAACAATTCCAACACACTTATGCGAAAACCTTGCAAACCAATGTCAAAGTGCAT
AACTATGAAGCGCGTGTTCATCATTTTAAATCAGCGCGTGAGGCAGCGCTTTCGGCTAATTTTATTCCAGAATCTGTTTA
TGATACCTTGATTGAAACGGTCAATGCTAACCTGCCTTTGCTTCATCGCTACGTGGAACTTCGCAAGAAAATCCTTAAAC
TGGATGATTTGAAAATGTACGATATTCATACGCCACTTTCTGAAATGGATATGAGTTTTACCTATGAAGAAGCTTTGGCA
AAAGCAGAAGATGTCTTGGCTGTTTTTGGCAAAGAATATTCTGAGCGTGTTCATCGTGCTTTTACAGAACGCTGGATTGA
CGTCCATGTCAATAAAGGCAAACGCTCTGGTGCCTACTCTGGTGGTTCGTATGATACCAATGCTTTCATGCTGTTAAATT
GGCAAGATACCTTGGATAATTTGTTTACCTTAGTTCACGAAACGGGGCACAGCCTGCATTCGACATTTACACGTGAAAAT
CAACCCTATGTTTATGGAGATTATAGTATTTTTTTGGCAGAAATTGCTTCAACAACTAATGAAAATATTTTGACAGAAAC
ACTTTTGAAAGAAGTTGATGATGACAAAGCACGCTTTGCAATTTTGAATCATTATCTTGATGGCTTCAAGAGCACCATTT
TCCGTCAAGCACAATTTGCAGAATTTGAAGATATCATTCATAAGGCAGACCAAGCTGGAGAAGTGTTGACGAGTGATTAC
CTCAACCAACTTTATGCCGACTTAAACGAGAAATATTATGGACTCAGCAAAGCAGACAACCCAGAAATCCAATACGAATG
GGCACGCATTCCGCATTTCTACTACAATTACTATGTTTACCAATACGCCACAGGATTTGCGGCAGCTAGTTATTTAGCTG
ATAAGGTTGTTCACGGTACACAAGCTGATATTGACCGCTACCTTGATTATCTGAAAGCAGGTAATTCTGATTATCCGCTT
AATGTGATTAAAAAAGCTGGTGTGGATATGACAACAAGTGCTTATCTAGACGCTGCTTTCCGAATTTTCGAGGAACGCTT
GGATGAGTTGGAAGCTTTAATTGAAAAAGGAGCACATCTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
70.333 |
100 |
0.703 |