Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SGGB_RS02195 Genome accession   NC_017576
Coordinates   399392..400117 (+) Length   241 a.a.
NCBI ID   WP_009853437.1    Uniprot ID   A0A060RHE2
Organism   Streptococcus gallolyticus subsp. gallolyticus ATCC 43143     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 394392..405117
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGGB_RS02165 (SGGB_0382) - 394770..396191 (+) 1422 WP_009853431.1 NCS2 family permease -
  SGGB_RS02170 (SGGB_0383) tsaE 396376..396819 (+) 444 WP_009853432.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SGGB_RS02175 (SGGB_0384) - 396812..397324 (+) 513 WP_009853433.1 GNAT family N-acetyltransferase -
  SGGB_RS02180 (SGGB_0385) brpA 397335..398492 (+) 1158 WP_009853434.1 biofilm formation/cell division transcriptional regulator BrpA -
  SGGB_RS02185 (SGGB_0386) - 398610..398912 (-) 303 WP_009853435.1 hypothetical protein -
  SGGB_RS02190 (SGGB_0387) - 398909..399328 (-) 420 WP_009853436.1 HIT family protein -
  SGGB_RS02195 (SGGB_0388) pptA 399392..400117 (+) 726 WP_009853437.1 ABC transporter ATP-binding protein Regulator
  SGGB_RS02200 (SGGB_0389) - 400119..401153 (+) 1035 WP_009853438.1 ABC transporter permease -
  SGGB_RS02205 (SGGB_0390) ccrZ 401218..402012 (+) 795 WP_012961430.1 cell cycle regulator CcrZ -
  SGGB_RS02210 (SGGB_0391) trmB 402012..402650 (+) 639 WP_003063401.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SGGB_RS02220 (SGGB_0392) - 402993..404018 (+) 1026 WP_012961431.1 sensor domain-containing diguanylate cyclase -
  SGGB_RS02225 (SGGB_0394) - 404024..405091 (+) 1068 Protein_394 glycosyltransferase -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26751.00 Da        Isoelectric Point: 4.3757

>NTDB_id=48901 SGGB_RS02195 WP_009853437.1 399392..400117(+) (pptA) [Streptococcus gallolyticus subsp. gallolyticus ATCC 43143]
MLKIENVTGGYINIPVLKNISFEVGDGELIGLIGLNGAGKSTTINEIIGLLTPYQGQISIDGLTLAQDQAEYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDLNYDEAMARATELLELFRLSDKLEWFPINFSKGMKQKVMIICAFMVNPSLFIVDEPF
LGLDPLAISDLTELLAQEKAKGKAILMSTHVLDAAEKMCDRFVILHQGQIRATGTLAELREAFGDETATLNDIYMSLTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=48901 SGGB_RS02195 WP_009853437.1 399392..400117(+) (pptA) [Streptococcus gallolyticus subsp. gallolyticus ATCC 43143]
ATGTTAAAAATTGAAAATGTAACTGGGGGATATATTAACATCCCTGTCTTAAAAAATATTTCTTTTGAAGTTGGTGACGG
TGAGCTTATTGGCTTAATTGGTTTGAATGGGGCTGGTAAGTCAACGACAATCAATGAAATTATCGGACTTTTAACGCCAT
ATCAAGGGCAAATTTCGATTGATGGTTTGACTTTGGCGCAGGATCAGGCGGAATATCGTAAGAAAATCGGATTTATCCCA
GAAACGCCAAGTTTATATGAAGAACTGACTTTACGTGAACATTTAGAAACGGTTGCAATGGCTTATGACCTTAATTATGA
TGAGGCGATGGCGCGTGCGACAGAATTGTTGGAACTTTTCCGTTTATCTGATAAATTAGAGTGGTTTCCGATTAATTTCT
CTAAAGGGATGAAGCAGAAGGTCATGATTATTTGTGCCTTTATGGTCAATCCAAGTTTGTTTATCGTTGATGAACCCTTT
TTGGGATTGGACCCATTAGCGATTTCTGATTTGACAGAATTATTGGCGCAAGAAAAGGCAAAAGGAAAAGCGATTTTGAT
GTCAACACACGTTTTGGATGCTGCTGAAAAGATGTGTGACCGTTTTGTGATTTTGCATCAAGGGCAAATTCGTGCGACTG
GTACATTAGCAGAGCTACGTGAAGCTTTTGGTGATGAGACAGCAACGCTTAATGATATTTATATGTCATTGACTAAAGAG
GTGTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A060RHE2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

80.335

99.17

0.797
  pptA Streptococcus thermophilus LMD-9

79.916

99.17

0.793

Multiple sequence alignment