Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | LP6_RS11315 | Genome accession | NC_021350 |
| Coordinates | 2487643..2487960 (-) | Length | 105 a.a. |
| NCBI ID | WP_011945930.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. pneumophila str. Thunder Bay | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2482643..2492960
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LP6_RS11295 (LP6_2188) | - | 2482777..2483751 (-) | 975 | WP_010947926.1 | chitinase | - |
| LP6_RS11300 (LP6_2189) | - | 2483959..2485044 (+) | 1086 | WP_015444177.1 | SRPBCC family protein | - |
| LP6_RS11305 (LP6_2190) | - | 2485205..2486326 (+) | 1122 | WP_015444176.1 | hypothetical protein | - |
| LP6_RS15880 | - | 2486392..2486628 (-) | 237 | Protein_2218 | rod shape-determining protein | - |
| LP6_RS11310 (LP6_2191) | - | 2486629..2487447 (-) | 819 | Protein_2219 | rod shape-determining protein | - |
| LP6_RS11315 (LP6_2192) | comEA | 2487643..2487960 (-) | 318 | WP_011945930.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| LP6_RS11320 (LP6_2193) | - | 2488052..2489467 (-) | 1416 | WP_010946545.1 | M20 family metallopeptidase | - |
| LP6_RS11325 (LP6_2194) | - | 2489442..2490533 (-) | 1092 | WP_013101202.1 | undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | - |
| LP6_RS11330 (LP6_2195) | nadC | 2490530..2491372 (-) | 843 | WP_013101201.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| LP6_RS11335 (LP6_2196) | - | 2491369..2492808 (-) | 1440 | WP_010946542.1 | cation:proton antiporter | - |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 11747.74 Da Isoelectric Point: 10.6194
>NTDB_id=48901 LP6_RS11315 WP_011945930.1 2487643..2487960(-) (comEA) [Legionella pneumophila subsp. pneumophila str. Thunder Bay]
MKARLIAILLSFIVIPFSSQAENEPQKTPAKQVLVKGKINLNTADVHSLTGSFKGIGKKRAEAIIAYRENHQGFKSLEEL
AEVKGIGQRFVDKNREKLKEIFVIN
MKARLIAILLSFIVIPFSSQAENEPQKTPAKQVLVKGKINLNTADVHSLTGSFKGIGKKRAEAIIAYRENHQGFKSLEEL
AEVKGIGQRFVDKNREKLKEIFVIN
Nucleotide
Download Length: 318 bp
>NTDB_id=48901 LP6_RS11315 WP_011945930.1 2487643..2487960(-) (comEA) [Legionella pneumophila subsp. pneumophila str. Thunder Bay]
ATGAAAGCAAGACTCATTGCTATTTTGTTGTCATTTATTGTTATCCCTTTCTCTTCTCAAGCTGAGAACGAGCCTCAAAA
AACTCCAGCTAAACAAGTCCTTGTTAAGGGCAAGATTAATCTCAATACAGCGGATGTGCATTCTTTAACAGGCTCTTTTA
AAGGGATAGGAAAAAAACGGGCTGAAGCTATTATTGCTTATAGAGAGAATCATCAAGGCTTTAAATCTCTGGAAGAGCTT
GCGGAAGTCAAGGGTATAGGGCAGCGTTTTGTAGATAAAAATAGAGAAAAACTGAAAGAAATTTTCGTTATTAATTAA
ATGAAAGCAAGACTCATTGCTATTTTGTTGTCATTTATTGTTATCCCTTTCTCTTCTCAAGCTGAGAACGAGCCTCAAAA
AACTCCAGCTAAACAAGTCCTTGTTAAGGGCAAGATTAATCTCAATACAGCGGATGTGCATTCTTTAACAGGCTCTTTTA
AAGGGATAGGAAAAAAACGGGCTGAAGCTATTATTGCTTATAGAGAGAATCATCAAGGCTTTAAATCTCTGGAAGAGCTT
GCGGAAGTCAAGGGTATAGGGCAGCGTTTTGTAGATAAAAATAGAGAAAAACTGAAAGAAATTTTCGTTATTAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Legionella pneumophila str. Paris |
99.048 |
100 |
0.99 |
| comEA | Legionella pneumophila strain ERS1305867 |
99.048 |
100 |
0.99 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
35.455 |
100 |
0.371 |
| comEA | Staphylococcus aureus N315 |
38.384 |
94.286 |
0.362 |
| comEA | Staphylococcus aureus MW2 |
38.384 |
94.286 |
0.362 |