Detailed information NTG0488636

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KFU68_RS22240
• Genome accession: NZ_CP073946
• Coordinates: 4552250..4553275 (+)
• Length: 341 a.a.
• NCBI ID: WP_257201889.1
• Uniprot ID: -
• Organism: Escherichia coli strain MB51
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4547250..4558275

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KFU68_RS22220 (KFU68_22005)	metJ	4548311..4548628 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
KFU68_RS22225 (KFU68_22010)	yiiX	4548812..4549420 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
KFU68_RS22230 (KFU68_22015)	rpmE	4549481..4549693 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
KFU68_RS22235 (KFU68_22020)	priA	4549896..4552094 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
KFU68_RS22240 (KFU68_22025)	cytR	4552250..4553275 (+)	1026	WP_257201889.1	DNA-binding transcriptional regulator CytR	Regulator
KFU68_RS22245 (KFU68_22030)	ftsN	4553367..4554326 (+)	960	WP_257201890.1	cell division protein FtsN	-
KFU68_RS22250 (KFU68_22035)	hslV	4554419..4554949 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
KFU68_RS22255 (KFU68_22040)	hslU	4554959..4556290 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
KFU68_RS22260 (KFU68_22045)	menA	4556357..4557283 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KFU68_RS22265 (KFU68_22050)	rraA	4557376..4557861 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
KFU68_RS22270 (KFU68_22055)	zapB	4557946..4558191 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37873.83 Da
• Isoelectric Point: 6.4919

>NTDB_id=488636 KFU68_RS22240 WP_257201889.1 4552250..4553275(+) (cytR) [Escherichia coli strain MB51]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQHQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDQQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=488636 KFU68_RS22240 WP_257201889.1 4552250..4553275(+) (cytR) [Escherichia coli strain MB51]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAACATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCAGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625