Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   IF730_RS00470 Genome accession   NZ_CP062354
Coordinates   84411..85454 (+) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain NAS_AN_206     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 79411..90454
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IF730_RS00440 (IF730_00435) - 79718..79829 (+) 112 Protein_86 hypothetical protein -
  IF730_RS00445 (IF730_00440) - 79858..80271 (+) 414 WP_001566709.1 hypothetical protein -
  IF730_RS00450 (IF730_00445) - 80761..81747 (-) 987 WP_000999713.1 aromatic acid exporter family protein -
  IF730_RS00455 (IF730_00450) map 82337..83095 (+) 759 WP_000636142.1 type I methionyl aminopeptidase -
  IF730_RS00460 (IF730_00455) - 83312..83698 (+) 387 WP_001110179.1 hypothetical protein -
  IF730_RS00465 (IF730_00460) liaF 83713..84414 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  IF730_RS00470 (IF730_00465) vraS 84411..85454 (+) 1044 WP_001017131.1 sensor histidine kinase Regulator
  IF730_RS00475 (IF730_00470) vraR 85444..86073 (+) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  IF730_RS00480 (IF730_00475) - 86185..87402 (-) 1218 WP_000037079.1 YihY/virulence factor BrkB family protein -
  IF730_RS00485 (IF730_00480) - 87680..87955 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  IF730_RS00490 (IF730_00485) - 87962..88426 (-) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  IF730_RS00495 (IF730_00490) - 88573..88773 (+) 201 WP_000180460.1 DUF1128 family protein -
  IF730_RS00500 (IF730_00495) - 88776..90032 (+) 1257 WP_001789555.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=488302 IF730_RS00470 WP_001017131.1 84411..85454(+) (vraS) [Staphylococcus aureus strain NAS_AN_206]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=488302 IF730_RS00470 WP_001017131.1 84411..85454(+) (vraS) [Staphylococcus aureus strain NAS_AN_206]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTATTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCATACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAATTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCTCGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1