Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | IF739_RS02390 | Genome accession | NZ_CP062346 |
| Coordinates | 450618..450917 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844415.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain NAS_AN_261 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 445618..455917
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IF739_RS02350 (IF739_02335) | - | 445679..445882 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| IF739_RS02355 (IF739_02340) | - | 445879..446865 (+) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| IF739_RS02360 (IF739_02345) | - | 446865..447194 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| IF739_RS02365 (IF739_02350) | - | 447191..447814 (+) | 624 | WP_047213494.1 | MBL fold metallo-hydrolase | - |
| IF739_RS02370 (IF739_02355) | comGA | 447866..448840 (+) | 975 | WP_000697222.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| IF739_RS02375 (IF739_02360) | comGB | 448812..449882 (+) | 1071 | Protein_436 | competence type IV pilus assembly protein ComGB | - |
| IF739_RS02380 (IF739_02365) | comGC | 449896..450207 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| IF739_RS02385 (IF739_02370) | comGD | 450185..450631 (+) | 447 | WP_072357807.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| IF739_RS02390 (IF739_02375) | comGE | 450618..450917 (+) | 300 | WP_000844415.1 | hypothetical protein | Machinery gene |
| IF739_RS02395 (IF739_02380) | comGF | 450835..451332 (+) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| IF739_RS02400 (IF739_02385) | - | 451429..451575 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| IF739_RS02405 (IF739_02390) | - | 451565..452089 (+) | 525 | WP_001015120.1 | shikimate kinase | - |
| IF739_RS02410 (IF739_02395) | gcvT | 452248..453339 (+) | 1092 | WP_000093354.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| IF739_RS02415 (IF739_02400) | gcvPA | 453359..454705 (+) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11135.28 Da Isoelectric Point: 9.9215
>NTDB_id=488151 IF739_RS02390 WP_000844415.1 450618..450917(+) (comGE) [Staphylococcus aureus strain NAS_AN_261]
MKSYKCKGSFLIDSMAGFLLIVLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIVLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=488151 IF739_RS02390 WP_000844415.1 450618..450917(+) (comGE) [Staphylococcus aureus strain NAS_AN_261]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGTATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGTATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
85.965 |
100 |
0.99 |
| comGE | Staphylococcus aureus N315 |
97.98 |
100 |
0.98 |