Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | IF740_RS02400 | Genome accession | NZ_CP062344 |
| Coordinates | 448860..449159 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain NAS_AN_265 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 443860..454159
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IF740_RS02360 (IF740_02370) | - | 443920..444123 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| IF740_RS02365 (IF740_02375) | - | 444120..445106 (+) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| IF740_RS02370 (IF740_02380) | - | 445106..445435 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| IF740_RS02375 (IF740_02385) | - | 445432..446055 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| IF740_RS02380 (IF740_02390) | comGA | 446108..447082 (+) | 975 | WP_000697235.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| IF740_RS02385 (IF740_02395) | comGB | 447054..448124 (+) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| IF740_RS02390 (IF740_02400) | comGC | 448138..448449 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| IF740_RS02395 (IF740_02405) | comGD | 448427..448873 (+) | 447 | WP_072433556.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| IF740_RS02400 (IF740_02410) | comGE | 448860..449159 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| IF740_RS02405 (IF740_02415) | comGF | 449077..449574 (+) | 498 | WP_029694076.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| IF740_RS02410 (IF740_02420) | - | 449671..449817 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| IF740_RS02415 (IF740_02425) | - | 449807..450331 (+) | 525 | WP_001015121.1 | shikimate kinase | - |
| IF740_RS02420 (IF740_02430) | gcvT | 450490..451581 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| IF740_RS02425 (IF740_02435) | gcvPA | 451601..452947 (+) | 1347 | WP_000019678.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=488111 IF740_RS02400 WP_000844413.1 448860..449159(+) (comGE) [Staphylococcus aureus strain NAS_AN_265]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=488111 IF740_RS02400 WP_000844413.1 448860..449159(+) (comGE) [Staphylococcus aureus strain NAS_AN_265]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |