Detailed information NTG0487608

Bioinformatically predicted

Overview

• Name: clpE
• Type: Regulator
• Locus tag: KEF49_RS06565
• Genome accession: NZ_CP073635
• Coordinates: 1306946..1309042 (-)
• Length: 698 a.a.
• NCBI ID: WP_212101179.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain Ba13
• Function: repress competence development (at the early growth phase) (predicted from homology) Competence regulation

Genomic Context

Location: 1301946..1314042

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KEF49_RS06540 (KEF49_06540)	-	1302523..1302783 (+)	261	WP_065981312.1	aspartyl-phosphate phosphatase Spo0E family protein	-
KEF49_RS06545 (KEF49_06545)	-	1302992..1304509 (-)	1518	WP_115997171.1	ATP-binding protein	-
KEF49_RS06550 (KEF49_06550)	-	1304709..1305155 (+)	447	WP_065981314.1	MarR family transcriptional regulator	-
KEF49_RS06555 (KEF49_06555)	motB	1305192..1305989 (-)	798	WP_212101176.1	flagellar motor protein MotB	-
KEF49_RS06560 (KEF49_06560)	motA	1305961..1306773 (-)	813	WP_045506501.1	flagellar motor stator protein MotA	-
KEF49_RS06565 (KEF49_06565)	clpE	1306946..1309042 (-)	2097	WP_212101179.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
KEF49_RS06570 (KEF49_06570)	-	1309442..1310479 (+)	1038	WP_071346919.1	hypothetical protein	-
KEF49_RS06575 (KEF49_06575)	-	1310578..1311699 (+)	1122	WP_212101183.1	hypothetical protein	-
KEF49_RS06580 (KEF49_06580)	queC	1311951..1312610 (+)	660	WP_003154679.1	7-cyano-7-deazaguanine synthase QueC	-
KEF49_RS06585 (KEF49_06585)	queD	1312611..1313051 (+)	441	WP_045506490.1	6-carboxytetrahydropterin synthase QueD	-
KEF49_RS06590 (KEF49_06590)	queE	1313044..1313775 (+)	732	WP_212101186.1	7-carboxy-7-deazaguanine synthase QueE	-

Sequence

Protein

• Length: 698 a.a.
• Molecular weight: 77963.10 Da
• Isoelectric Point: 5.2469

>NTDB_id=487608 KEF49_RS06565 WP_212101179.1 1306946..1309042(-) (clpE) [Bacillus amyloliquefaciens strain Ba13]
MRCQHCQKNEATIRLNMQVNSIQKQFVLCETCYTELTRKPSMSMGPQSFGFPFEQGFAPDQHKPQAGRKKGLLDELAQNV
TNGAKAGLIDPVIGRDDEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIAEGDVPNKLKNKELYLLDVASLVAN
TGIRGQFEERMKQLMNELKERKNVILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVIGATTLKEYRQIEKDAALE
RRFQPVMVHEPSIEQAISILEGIKDKYEKYHSVTFSDEAIKACVTLSSRYIQDRHLPDKAIDLLDEAGSKANLELDTVNE
EEAAERLKAIDAEKTKALQEENYELAAKLRDEEAALEKQLAQESPASFSEIGAEHIQAIIEQKTGIPVGKLQADEQVKMK
ELEERLHQRVIGQEKAVKKVAKAVRRSRAGLKSKNRPVGSFLFVGPTGVGKTELSKTLADELFGTKDSIIRLDMSEYMEK
HTVSKIIGSPPGYVGHDEAGQLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVLIMTSNA
GTGEKQAKVGFQSEESVMEEQTLIDSLSSFFKPEFLNRFDSIIEFQSLKKEHLVKIVSLLLAELEDTLKERGISLCVTDD
AKEKIAEIGYHPAFGARPLRRTIQELIEDEMTDLLLDDNEIKAFHVVMEEDDIKVRAQ

Nucleotide

• Length: 2097 bp

>NTDB_id=487608 KEF49_RS06565 WP_212101179.1 1306946..1309042(-) (clpE) [Bacillus amyloliquefaciens strain Ba13]
ATGCGTTGTCAACATTGTCAGAAAAACGAGGCGACGATTCGCCTGAACATGCAAGTCAATTCCATTCAAAAACAATTCGT
TTTATGTGAAACATGTTATACAGAATTAACCCGAAAACCGTCTATGAGCATGGGGCCGCAATCTTTCGGATTCCCGTTTG
AGCAAGGTTTCGCTCCGGATCAACATAAACCGCAGGCCGGCCGTAAAAAAGGCCTGCTCGACGAGCTCGCCCAAAACGTC
ACAAACGGCGCAAAAGCAGGTCTGATTGATCCTGTGATCGGCCGCGATGATGAAGTGGCGCGCGTCATTGAAATTTTGAA
CCGCCGGAATAAAAACAACCCGGTGCTTATCGGTGAACCGGGTGTCGGTAAAACGGCTATTGCAGAAGGCTTAGCGCTTA
AAATCGCTGAAGGCGATGTGCCGAATAAATTGAAAAACAAAGAGCTTTATCTGCTTGACGTCGCTTCCCTCGTTGCCAAT
ACAGGCATCAGAGGCCAGTTTGAAGAAAGAATGAAACAATTAATGAACGAATTAAAAGAGCGGAAAAACGTCATTTTGTT
CATTGATGAGATTCACCTTCTTGTAGGCGCCGGCTCGGCCGAGGGATCAATGGATGCCGGGAACATCCTGAAACCTGCGC
TTGCCAGAGGCGAACTGCAGGTCATCGGGGCGACGACATTGAAAGAGTACCGCCAGATTGAAAAAGATGCGGCGCTTGAA
AGACGCTTCCAGCCTGTCATGGTTCACGAACCTTCAATAGAACAAGCCATCAGCATTCTTGAAGGCATTAAAGATAAATA
TGAGAAATATCACAGCGTCACATTCAGCGATGAAGCAATCAAGGCGTGTGTTACGCTTTCTTCCCGCTACATTCAGGACC
GCCACCTGCCGGATAAAGCGATCGACTTGTTAGATGAAGCCGGCTCCAAAGCAAATCTGGAGCTTGATACCGTAAATGAA
GAAGAAGCGGCTGAGCGACTCAAAGCAATTGACGCGGAGAAAACAAAAGCGCTTCAAGAAGAAAATTATGAGCTTGCCGC
GAAACTGCGTGATGAAGAAGCGGCATTGGAAAAGCAGCTGGCACAAGAATCACCGGCCTCTTTTTCAGAAATCGGGGCGG
AGCATATTCAAGCCATCATTGAACAGAAAACAGGCATTCCGGTCGGAAAACTGCAGGCTGATGAACAAGTCAAAATGAAA
GAACTTGAAGAGCGCCTTCATCAGCGCGTCATCGGTCAGGAAAAAGCCGTGAAAAAAGTGGCGAAAGCGGTAAGACGAAG
CCGCGCCGGCTTAAAATCCAAAAACAGACCTGTCGGCTCCTTCCTCTTTGTCGGACCGACCGGGGTCGGAAAAACCGAGT
TATCAAAAACACTCGCGGATGAACTTTTCGGCACAAAAGATTCCATCATCCGGCTCGATATGAGTGAATACATGGAAAAA
CACACCGTTTCAAAAATTATCGGTTCACCGCCGGGATATGTCGGACACGATGAAGCCGGTCAATTAACGGAAAAAGTGCG
GCGCAATCCGTACAGCATCGTGCTGCTTGATGAGATTGAAAAAGCGCATCCTGACGTCCAGCATATGTTCCTGCAGATTA
TGGAGGACGGACGTCTGACAGACAGCCAGGGCAGAACGGTAAGCTTCAAAGATACCGTTTTGATCATGACAAGCAATGCG
GGAACCGGCGAAAAACAGGCGAAAGTCGGGTTCCAATCTGAAGAAAGCGTCATGGAAGAACAAACGCTGATTGATTCACT
GAGCTCGTTCTTTAAACCTGAATTTTTAAACCGGTTTGACAGCATCATTGAATTCCAATCTCTGAAAAAAGAACATCTCG
TAAAAATCGTCAGCCTGCTTCTCGCAGAGCTTGAAGACACATTAAAAGAGCGCGGCATCAGTCTCTGCGTCACAGACGAT
GCGAAAGAAAAAATCGCTGAAATCGGCTACCACCCTGCTTTCGGAGCACGCCCGCTCAGAAGAACGATCCAAGAATTGAT
CGAGGACGAAATGACAGACCTCTTATTGGATGACAATGAAATAAAAGCCTTCCATGTTGTAATGGAAGAGGATGACATCA
AAGTCCGTGCACAATAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (436-602)

• AAA lid domain (AAA_lid_9) (252-351)

• ATPase family associated with various cellular activities (AAA) (AAA) (115-246)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (608-679)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpE	Streptococcus mutans UA159	57.319	100	0.6
clpC	Lactococcus lactis subsp. cremoris KW2	56.403	100	0.593
clpE	Streptococcus pneumoniae TIGR4	56.207	100	0.59
clpE	Streptococcus pneumoniae Rx1	56.071	100	0.589
clpE	Streptococcus pneumoniae D39	56.071	100	0.589
clpE	Streptococcus pneumoniae R6	56.071	100	0.589
clpC	Bacillus subtilis subsp. subtilis str. 168	54.631	91.261	0.499
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	47.214	92.55	0.437
clpC	Streptococcus pneumoniae TIGR4	46.204	88.682	0.41
clpC	Streptococcus pneumoniae Rx1	46.204	88.682	0.41
clpC	Streptococcus pneumoniae D39	46.204	88.682	0.41
clpC	Streptococcus thermophilus LMD-9	45.325	90.401	0.41
clpC	Streptococcus mutans UA159	43.895	92.693	0.407
clpC	Streptococcus thermophilus LMG 18311	44.849	90.401	0.405