Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   IHQ43_RS27330 Genome accession   NZ_CP062253
Coordinates   6120955..6121359 (-) Length   134 a.a.
NCBI ID   WP_007953330.1    Uniprot ID   Q3K5A9
Organism   Pseudomonas gozinkensis strain IzPS32d     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6115955..6126359
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IHQ43_RS27315 - 6117902..6119965 (-) 2064 WP_192562714.1 methyl-accepting chemotaxis protein -
  IHQ43_RS27320 - 6119979..6120518 (-) 540 WP_192562715.1 chemotaxis protein CheW -
  IHQ43_RS27325 pilH 6120529..6120894 (-) 366 WP_007953328.1 twitching motility response regulator PilH -
  IHQ43_RS27330 pilG 6120955..6121359 (-) 405 WP_007953330.1 twitching motility response regulator PilG Regulator
  IHQ43_RS27335 gshB 6121584..6122534 (+) 951 WP_192562716.1 glutathione synthase -
  IHQ43_RS27340 - 6122642..6123541 (+) 900 WP_192562717.1 energy transducer TonB -
  IHQ43_RS27345 - 6123711..6124283 (+) 573 WP_007953333.1 YqgE/AlgH family protein -
  IHQ43_RS27350 ruvX 6124283..6124720 (+) 438 WP_007953334.1 Holliday junction resolvase RuvX -
  IHQ43_RS27355 pyrR 6124802..6125305 (+) 504 WP_192562718.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  IHQ43_RS27360 - 6125333..6126337 (+) 1005 WP_007913665.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14532.86 Da        Isoelectric Point: 6.7107

>NTDB_id=487403 IHQ43_RS27330 WP_007953330.1 6120955..6121359(-) (pilG) [Pseudomonas gozinkensis strain IzPS32d]
MEQQSSALKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDALAKIADHHPGIIFVDIMMPRLDGYQTCALIKNNNAFK
GTPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLDAISAHVPGFAAALPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=487403 IHQ43_RS27330 WP_007953330.1 6120955..6121359(-) (pilG) [Pseudomonas gozinkensis strain IzPS32d]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTGATCGACGACTCGAAAACGATTCGTCGCACCGCCGAGACCCTGTT
GAAAAATGCAGGGTGCGAAGTCATCACCGCGATCGACGGTTTTGACGCCCTGGCGAAGATCGCCGACCACCATCCCGGGA
TCATCTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAACGCGTTCAAG
GGCACGCCGGTGATCATGCTGTCGTCCCGGGACGGGCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCCGATCAATT
TTTGACCAAACCTTTCAGCAAGGAAGAACTGCTCGACGCGATTTCGGCCCATGTTCCGGGCTTCGCTGCCGCTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q3K5A9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

93.284

0.694