Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   IF189_RS26615 Genome accession   NZ_CP062251
Coordinates   5920720..5921124 (-) Length   134 a.a.
NCBI ID   WP_085709083.1    Uniprot ID   -
Organism   Pseudomonas sp. IzPS59     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5915720..5926124
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IF189_RS26600 - 5917669..5919729 (-) 2061 WP_085709085.1 methyl-accepting chemotaxis protein -
  IF189_RS26605 - 5919743..5920282 (-) 540 WP_085709084.1 chemotaxis protein CheW -
  IF189_RS26610 pilH 5920293..5920658 (-) 366 WP_011336365.1 twitching motility response regulator PilH -
  IF189_RS26615 pilG 5920720..5921124 (-) 405 WP_085709083.1 twitching motility response regulator PilG Regulator
  IF189_RS26620 gshB 5921349..5922299 (+) 951 WP_114886081.1 glutathione synthase -
  IF189_RS26625 - 5922407..5923306 (+) 900 WP_192552493.1 energy transducer TonB -
  IF189_RS26630 - 5923366..5923938 (+) 573 WP_134828394.1 YqgE/AlgH family protein -
  IF189_RS26635 ruvX 5923938..5924375 (+) 438 WP_085709079.1 Holliday junction resolvase RuvX -
  IF189_RS26640 pyrR 5924457..5924960 (+) 504 WP_114886085.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  IF189_RS26645 - 5924988..5925992 (+) 1005 WP_025109148.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14524.83 Da        Isoelectric Point: 5.7193

>NTDB_id=487346 IF189_RS26615 WP_085709083.1 5920720..5921124(-) (pilG) [Pseudomonas sp. IzPS59]
MEQQSSALKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
ATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLDAIAAHVPGFAADLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=487346 IF189_RS26615 WP_085709083.1 5920720..5921124(-) (pilG) [Pseudomonas sp. IzPS59]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTGATCGACGACTCGAAAACGATTCGTCGCACCGCCGAGACCCTGTT
GAAAAATGCAGGGTGCGAAGTCATCACGGCGATCGACGGTTTCGACGCCCTGGCGAAGATCGCCGACAACCACCCCGGGA
TCATTTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCCTTCAAG
GCGACGCCGGTGATCATGCTGTCGTCCCGCGACGGGCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCCGATCAATT
TTTGACCAAACCTTTCAGCAAGGAAGAACTGCTCGACGCGATTGCGGCCCATGTTCCGGGCTTTGCCGCTGATTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

93.284

0.694