Detailed information NTG0487221

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: KDH82_RS06370
• Genome accession: NZ_CP073350
• Coordinates: 1460278..1463181 (-)
• Length: 967 a.a.
• NCBI ID: WP_021664745.1
• Uniprot ID: -
• Organism: Porphyromonas gingivalis strain LyG-2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1455278..1468181

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KDH82_RS06360 (KDH82_06365)	-	1456576..1458873 (-)	2298	WP_005873452.1	UvrD-helicase domain-containing protein	-
KDH82_RS06365 (KDH82_06370)	-	1458873..1460252 (-)	1380	WP_211599711.1	SWIM zinc finger family protein	-
KDH82_RS06370 (KDH82_06375)	uvrA	1460278..1463181 (-)	2904	WP_021664745.1	excinuclease ABC subunit UvrA	Machinery gene
KDH82_RS06375 (KDH82_06380)	-	1463252..1464625 (-)	1374	WP_211599712.1	gliding motility-associated C-terminal domain-containing protein	-
KDH82_RS06380 (KDH82_06385)	-	1464720..1465454 (-)	735	WP_004584270.1	ATP-binding cassette domain-containing protein	-
KDH82_RS06385 (KDH82_06390)	-	1465473..1466219 (-)	747	WP_004584269.1	ABC transporter permease	-
KDH82_RS06390 (KDH82_06395)	-	1466456..1467796 (-)	1341	WP_211599713.1	T9SS type A sorting domain-containing protein	-

Sequence

Protein

• Length: 967 a.a.
• Molecular weight: 108012.80 Da
• Isoelectric Point: 7.0980

>NTDB_id=487221 KDH82_RS06370 WP_021664745.1 1460278..1463181(-) (uvrA) [Porphyromonas gingivalis strain LyG-2]
MHDTVINVKDKIARHDAVEVYGARVHNLKNIDVCIPRHSLTVITGMSGSGKSSLAFDTLFAEGQRRYIETFSAYARNFLG
GGMERPDVDEIKGLSPVISIEQKTTNRNPRSTVGTVTEVYDFFRLLYARAAEAYSYAGGKKMVKYTEEQIFHLILEKYDG
RKIALLAPVVRSRKGHYKELFERLRKKGYLHVRVDGEIREILHGMKLDRYKMHDVEVQIDKLCVASNQSKRIAESLALAM
REGEGLVMVLDSEKNEVGHFSRMMMCPDTGISYSDPAPHNFSFNSPHGYCPRCKGLGEVNLPDMDKIIPSREKSIYEGGI
EPLGKYKNNLFFWQIEALCEKYDVTIKTPLRDLPEELIEDILYGTDELLTINNKALGQSRYALSFDGVAKYILMQAEESD
ASATAQKWADQFLKTTTCPDCAGKRLNKEALSYRLAGKDIAEVNAMDIKTLIEWVDSLDEHLLDTQRAISIEILKEIRTR
LGFLKDVGLEYLTMNRAAASLSGGESQRIRLATQIGSKLVEVLYILDEPSIGLHQRDNLRLIHSLQDLRDIGNTVVVVEH
DQDMMLHADYVIDLGPRAGRHGGEVVFAGSPEEMVQANTLTADYISGRKRIEKSIGRRDGSGKTIKLFGAKGNNLQNIDV
IFPLGVFICVTGVSGSGKSTLINKTLFPAISQKLYRSLQDPMPYDRIEGLEHIDKIIAVDQSPIGRTLRSNAATYTGLFT
DIRALFVGLPESKARGYKPGRFSFNVKGGRCEVCKGNGYKTIEMNFLPDVFAPCEGCRGKRYNRETLEVRYKGKSIADVL
DMTINKAVEFFEHAPHILSKLSVLQEVGLGYIKLGQPSSTLSGGECQRVKLATELSKRDTGNTLYVLDEPTTGLHFEDVR
VLLGILNRLIERGNTVIVIEHNLDVIRCADYLIDIGPEGGAGGGQLLYQGKMEDIIECKNSYTAQFVKAELEKGRIDTVH
MNSADNI

Nucleotide

• Length: 2904 bp

>NTDB_id=487221 KDH82_RS06370 WP_021664745.1 1460278..1463181(-) (uvrA) [Porphyromonas gingivalis strain LyG-2]
ATGCACGATACAGTTATAAACGTAAAAGACAAGATAGCTCGACACGATGCTGTGGAAGTCTATGGAGCACGGGTGCACAA
TCTGAAGAATATCGATGTGTGCATTCCGCGTCATAGCCTTACAGTCATCACTGGAATGAGTGGTAGCGGAAAGTCGTCAT
TGGCTTTCGATACCCTTTTTGCCGAAGGACAGCGACGGTACATAGAAACTTTTTCGGCTTATGCGCGGAATTTCCTCGGT
GGTGGTATGGAGCGCCCCGACGTGGACGAGATAAAAGGGCTGAGTCCGGTCATTTCCATAGAACAGAAGACGACCAATCG
GAATCCGAGATCGACTGTCGGTACCGTTACAGAGGTGTACGACTTCTTTCGTTTGCTCTATGCTCGTGCTGCTGAGGCTT
ATTCTTATGCCGGAGGAAAGAAGATGGTGAAATACACCGAGGAGCAAATCTTCCACCTCATTTTGGAAAAGTATGATGGC
CGTAAGATAGCTTTGTTAGCCCCGGTGGTTCGCTCGCGTAAGGGGCATTATAAGGAGCTATTCGAAAGGCTTCGTAAGAA
AGGCTATCTGCACGTACGCGTGGATGGTGAGATTCGCGAGATTTTGCATGGGATGAAGCTTGATCGCTATAAAATGCATG
ACGTCGAAGTGCAGATCGACAAGCTGTGCGTAGCATCGAATCAAAGCAAACGTATAGCGGAGAGCTTGGCACTGGCTATG
CGTGAAGGCGAAGGGCTTGTGATGGTGTTGGATTCGGAAAAAAACGAAGTGGGACATTTTAGTCGGATGATGATGTGTCC
TGATACGGGAATTTCGTATAGCGATCCGGCTCCGCACAATTTCAGTTTCAATTCCCCTCATGGCTATTGCCCGCGCTGTA
AGGGCTTGGGCGAAGTGAATCTGCCGGATATGGACAAGATCATTCCATCTCGTGAGAAGAGTATATACGAAGGTGGCATT
GAGCCATTGGGCAAATACAAAAACAATCTTTTCTTTTGGCAAATAGAGGCATTGTGCGAGAAGTACGATGTGACGATCAA
AACGCCTTTGCGCGATTTGCCGGAAGAGTTGATCGAGGATATCCTATATGGTACAGACGAACTACTGACTATCAACAACA
AAGCTTTGGGGCAGTCGAGGTATGCTCTCAGCTTCGATGGCGTGGCTAAGTATATATTGATGCAGGCAGAAGAATCGGAT
GCTTCGGCTACTGCGCAGAAATGGGCAGATCAGTTTCTCAAGACTACAACTTGCCCCGACTGTGCCGGCAAGCGTCTGAA
CAAAGAAGCTCTGTCTTATCGCTTGGCCGGCAAGGACATTGCAGAAGTGAATGCAATGGACATCAAGACTCTTATTGAAT
GGGTAGATTCTCTGGATGAACATCTGTTGGATACGCAACGGGCTATTTCTATAGAAATACTGAAAGAGATACGGACACGC
TTGGGGTTTCTTAAAGATGTGGGGTTGGAGTACTTGACGATGAACCGAGCTGCAGCATCCTTATCCGGAGGAGAAAGCCA
GCGTATTCGTTTGGCTACGCAGATCGGGAGCAAACTGGTTGAGGTCTTGTACATATTGGATGAACCGAGTATCGGTCTTC
ACCAAAGGGACAATCTTCGGTTGATTCATTCGCTTCAGGATTTGCGTGATATAGGCAATACAGTGGTAGTGGTGGAGCAT
GATCAGGATATGATGCTGCACGCCGACTATGTAATAGACTTAGGACCACGAGCCGGCAGACATGGTGGTGAAGTGGTGTT
TGCAGGCAGTCCGGAAGAGATGGTGCAGGCTAATACCCTGACTGCCGATTATATAAGTGGACGAAAGCGTATAGAAAAGT
CGATCGGCAGGAGAGATGGTAGTGGGAAAACGATAAAATTATTTGGAGCCAAAGGCAATAACCTGCAGAATATAGACGTT
ATCTTTCCGCTGGGGGTATTTATATGTGTTACCGGGGTCTCCGGTAGTGGGAAAAGTACATTGATCAATAAGACTCTATT
CCCTGCTATCAGCCAAAAGCTGTACCGCTCTTTGCAGGATCCGATGCCCTATGACCGTATAGAGGGGTTAGAGCATATAG
ATAAGATAATAGCCGTAGACCAAAGTCCTATCGGGCGGACGCTTAGAAGCAATGCAGCCACATATACGGGATTGTTTACC
GATATTCGCGCTCTTTTTGTCGGTCTGCCCGAGAGTAAAGCTCGTGGATATAAGCCGGGGCGTTTTTCTTTCAACGTCAA
AGGCGGACGCTGTGAGGTTTGTAAGGGTAATGGCTACAAGACGATCGAAATGAATTTTTTGCCCGATGTATTTGCTCCGT
GTGAGGGATGCCGGGGAAAGCGATACAACAGGGAGACACTCGAAGTCCGTTACAAAGGAAAATCCATTGCGGATGTTTTG
GATATGACTATCAATAAGGCTGTCGAATTTTTCGAACATGCACCTCATATTTTATCCAAGCTTTCCGTTTTACAGGAGGT
CGGTTTGGGCTATATCAAACTGGGACAACCATCCTCGACTTTGTCGGGAGGAGAGTGTCAACGTGTTAAATTAGCCACCG
AGCTGAGTAAACGTGACACGGGAAATACACTCTATGTATTAGATGAACCGACTACGGGCTTACATTTCGAAGATGTACGC
GTTTTGTTGGGGATCCTTAATCGACTGATAGAGAGAGGGAATACGGTAATAGTGATCGAACATAATTTGGATGTGATCCG
CTGTGCGGATTATTTGATTGATATAGGACCGGAGGGAGGAGCAGGTGGCGGACAGTTGCTTTACCAAGGGAAAATGGAGG
ATATAATAGAATGCAAGAATAGTTATACAGCTCAATTTGTGAAAGCCGAACTCGAAAAAGGCCGGATTGATACTGTACAC
ATGAATTCTGCAGACAATATATAA

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (303-408)

• UvrA interaction domain (UvrA_inter) (146-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	50.742	97.622	0.495
uvrA	Streptococcus pneumoniae TIGR4	50.742	97.622	0.495
uvrA	Streptococcus pneumoniae D39	50.742	97.622	0.495