Detailed information NTG0487189

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: KC155_RS06360
• Genome accession: NZ_CP073349
• Coordinates: 1460261..1463164 (-)
• Length: 967 a.a.
• NCBI ID: WP_021664745.1
• Uniprot ID: -
• Organism: Porphyromonas gingivalis strain LyG-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1455261..1468164

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KC155_RS06350 (KC155_06355)	-	1456559..1458856 (-)	2298	WP_005873452.1	UvrD-helicase domain-containing protein	-
KC155_RS06355 (KC155_06360)	-	1458856..1460235 (-)	1380	WP_211599711.1	SWIM zinc finger family protein	-
KC155_RS06360 (KC155_06365)	uvrA	1460261..1463164 (-)	2904	WP_021664745.1	excinuclease ABC subunit UvrA	Machinery gene
KC155_RS06365 (KC155_06370)	-	1463235..1464608 (-)	1374	WP_211599712.1	gliding motility-associated C-terminal domain-containing protein	-
KC155_RS06370 (KC155_06375)	-	1464703..1465437 (-)	735	WP_004584270.1	ATP-binding cassette domain-containing protein	-
KC155_RS06375 (KC155_06380)	-	1465456..1466202 (-)	747	WP_004584269.1	ABC transporter permease	-
KC155_RS06380 (KC155_06385)	-	1466439..1467779 (-)	1341	WP_211599713.1	T9SS type A sorting domain-containing protein	-

Sequence

Protein

• Length: 967 a.a.
• Molecular weight: 108012.80 Da
• Isoelectric Point: 7.0980

>NTDB_id=487189 KC155_RS06360 WP_021664745.1 1460261..1463164(-) (uvrA) [Porphyromonas gingivalis strain LyG-1]
MHDTVINVKDKIARHDAVEVYGARVHNLKNIDVCIPRHSLTVITGMSGSGKSSLAFDTLFAEGQRRYIETFSAYARNFLG
GGMERPDVDEIKGLSPVISIEQKTTNRNPRSTVGTVTEVYDFFRLLYARAAEAYSYAGGKKMVKYTEEQIFHLILEKYDG
RKIALLAPVVRSRKGHYKELFERLRKKGYLHVRVDGEIREILHGMKLDRYKMHDVEVQIDKLCVASNQSKRIAESLALAM
REGEGLVMVLDSEKNEVGHFSRMMMCPDTGISYSDPAPHNFSFNSPHGYCPRCKGLGEVNLPDMDKIIPSREKSIYEGGI
EPLGKYKNNLFFWQIEALCEKYDVTIKTPLRDLPEELIEDILYGTDELLTINNKALGQSRYALSFDGVAKYILMQAEESD
ASATAQKWADQFLKTTTCPDCAGKRLNKEALSYRLAGKDIAEVNAMDIKTLIEWVDSLDEHLLDTQRAISIEILKEIRTR
LGFLKDVGLEYLTMNRAAASLSGGESQRIRLATQIGSKLVEVLYILDEPSIGLHQRDNLRLIHSLQDLRDIGNTVVVVEH
DQDMMLHADYVIDLGPRAGRHGGEVVFAGSPEEMVQANTLTADYISGRKRIEKSIGRRDGSGKTIKLFGAKGNNLQNIDV
IFPLGVFICVTGVSGSGKSTLINKTLFPAISQKLYRSLQDPMPYDRIEGLEHIDKIIAVDQSPIGRTLRSNAATYTGLFT
DIRALFVGLPESKARGYKPGRFSFNVKGGRCEVCKGNGYKTIEMNFLPDVFAPCEGCRGKRYNRETLEVRYKGKSIADVL
DMTINKAVEFFEHAPHILSKLSVLQEVGLGYIKLGQPSSTLSGGECQRVKLATELSKRDTGNTLYVLDEPTTGLHFEDVR
VLLGILNRLIERGNTVIVIEHNLDVIRCADYLIDIGPEGGAGGGQLLYQGKMEDIIECKNSYTAQFVKAELEKGRIDTVH
MNSADNI

Nucleotide

• Length: 2904 bp

>NTDB_id=487189 KC155_RS06360 WP_021664745.1 1460261..1463164(-) (uvrA) [Porphyromonas gingivalis strain LyG-1]
ATGCACGATACAGTTATAAACGTAAAAGACAAGATAGCTCGACACGATGCTGTGGAAGTCTATGGAGCACGGGTGCACAA
TCTGAAGAATATCGATGTGTGCATTCCGCGTCATAGCCTTACAGTCATCACTGGAATGAGTGGTAGCGGAAAGTCGTCAT
TGGCTTTCGATACCCTTTTTGCCGAAGGACAGCGACGGTACATAGAAACTTTTTCGGCTTATGCGCGGAATTTCCTCGGT
GGTGGTATGGAGCGCCCCGACGTGGACGAGATAAAAGGGCTGAGTCCGGTCATTTCCATAGAACAGAAGACGACCAATCG
GAATCCGAGATCGACTGTCGGTACCGTTACAGAGGTGTACGACTTCTTTCGTTTGCTCTATGCTCGTGCTGCTGAGGCTT
ATTCTTATGCCGGAGGAAAGAAGATGGTGAAATACACCGAGGAGCAAATCTTCCACCTCATTTTGGAAAAGTATGATGGC
CGTAAGATAGCTTTGTTAGCCCCGGTGGTTCGCTCGCGTAAGGGGCATTATAAGGAGCTATTCGAAAGGCTTCGTAAGAA
AGGCTATCTGCACGTACGCGTGGATGGTGAGATTCGCGAGATTTTGCATGGGATGAAGCTTGATCGCTATAAAATGCATG
ACGTCGAAGTGCAGATCGACAAGCTGTGCGTAGCATCGAATCAAAGCAAACGTATAGCGGAGAGCTTGGCACTGGCTATG
CGTGAAGGCGAAGGGCTTGTGATGGTGTTGGATTCGGAAAAAAACGAAGTGGGACATTTTAGTCGGATGATGATGTGTCC
TGATACGGGAATTTCGTATAGCGATCCGGCTCCGCACAATTTCAGTTTCAATTCCCCTCATGGCTATTGCCCGCGCTGTA
AGGGCTTGGGCGAAGTGAATCTGCCGGATATGGACAAGATCATTCCATCTCGTGAGAAGAGTATATACGAAGGTGGCATT
GAGCCATTGGGCAAATACAAAAACAATCTTTTCTTTTGGCAAATAGAGGCATTGTGCGAGAAGTACGATGTGACGATCAA
AACGCCTTTGCGCGATTTGCCGGAAGAGTTGATCGAGGATATCCTATATGGTACAGACGAACTACTGACTATCAACAACA
AAGCTTTGGGGCAGTCGAGGTATGCTCTCAGCTTCGATGGCGTGGCTAAGTATATATTGATGCAGGCAGAAGAATCGGAT
GCTTCGGCTACTGCGCAGAAATGGGCAGATCAGTTTCTCAAGACTACAACTTGCCCCGACTGTGCCGGCAAGCGTCTGAA
CAAAGAAGCTCTGTCTTATCGCTTGGCCGGCAAGGACATTGCAGAAGTGAATGCAATGGACATCAAGACTCTTATTGAAT
GGGTAGATTCTCTGGATGAACATCTGTTGGATACGCAACGGGCTATTTCTATAGAAATACTGAAAGAGATACGGACACGC
TTGGGGTTTCTTAAAGATGTGGGGTTGGAGTACTTGACGATGAACCGAGCTGCAGCATCCTTATCCGGAGGAGAAAGCCA
GCGTATTCGTTTGGCTACGCAGATCGGGAGCAAACTGGTTGAGGTCTTGTACATATTGGATGAACCGAGTATCGGTCTTC
ACCAAAGGGACAATCTTCGGTTGATTCATTCGCTTCAGGATTTGCGTGATATAGGCAATACAGTGGTAGTGGTGGAGCAT
GATCAGGATATGATGCTGCACGCCGACTATGTAATAGACTTAGGACCACGAGCCGGCAGACATGGTGGTGAAGTGGTGTT
TGCAGGCAGTCCGGAAGAGATGGTGCAGGCTAATACCCTGACTGCCGATTATATAAGTGGACGAAAGCGTATAGAAAAGT
CGATCGGCAGGAGAGATGGTAGTGGGAAAACGATAAAATTATTTGGAGCCAAAGGCAATAACCTGCAGAATATAGACGTT
ATCTTTCCGCTGGGGGTATTTATATGTGTTACCGGGGTCTCCGGTAGTGGGAAAAGTACATTGATCAATAAGACTCTATT
CCCTGCTATCAGCCAAAAGCTGTACCGCTCTTTGCAGGATCCGATGCCCTATGACCGTATAGAGGGGTTAGAGCATATAG
ATAAGATAATAGCCGTAGACCAAAGTCCTATCGGGCGGACGCTTAGAAGCAATGCAGCCACATATACGGGATTGTTTACC
GATATTCGCGCTCTTTTTGTCGGTCTGCCCGAGAGTAAAGCTCGTGGATATAAGCCGGGGCGTTTTTCTTTCAACGTCAA
AGGCGGACGCTGTGAGGTTTGTAAGGGTAATGGCTACAAGACGATCGAAATGAATTTTTTGCCCGATGTATTTGCTCCGT
GTGAGGGATGCCGGGGAAAGCGATACAACAGGGAGACACTCGAAGTCCGTTACAAAGGAAAATCCATTGCGGATGTTTTG
GATATGACTATCAATAAGGCTGTCGAATTTTTCGAACATGCACCTCATATTTTATCCAAGCTTTCCGTTTTACAGGAGGT
CGGTTTGGGCTATATCAAACTGGGACAACCATCCTCGACTTTGTCGGGAGGAGAGTGTCAACGTGTTAAATTAGCCACCG
AGCTGAGTAAACGTGACACGGGAAATACACTCTATGTATTAGATGAACCGACTACGGGCTTACATTTCGAAGATGTACGC
GTTTTGTTGGGGATCCTTAATCGACTGATAGAGAGAGGGAATACGGTAATAGTGATCGAACATAATTTGGATGTGATCCG
CTGTGCGGATTATTTGATTGATATAGGACCGGAGGGAGGAGCAGGTGGCGGACAGTTGCTTTACCAAGGGAAAATGGAGG
ATATAATAGAATGCAAGAATAGTTATACAGCTCAATTTGTGAAAGCCGAACTCGAAAAAGGCCGGATTGATACTGTACAC
ATGAATTCTGCAGACAATATATAA

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (303-408)

• UvrA interaction domain (UvrA_inter) (146-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	50.742	97.622	0.495
uvrA	Streptococcus pneumoniae TIGR4	50.742	97.622	0.495
uvrA	Streptococcus pneumoniae D39	50.742	97.622	0.495