Detailed information NTG0487173

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: KC155_RS01545
• Genome accession: NZ_CP073349
• Coordinates: 342699..343823 (+)
• Length: 374 a.a.
• NCBI ID: WP_211600073.1
• Uniprot ID: -
• Organism: Porphyromonas gingivalis strain LyG-1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 337699..348823

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KC155_RS10495	-	337768..338034 (+)	267	Protein_305	IS982 family transposase	-
KC155_RS01535 (KC155_01535)	-	338502..338891 (-)	390	WP_211600071.1	hypothetical protein	-
KC155_RS01540 (KC155_01540)	purL	339002..342706 (+)	3705	WP_211600072.1	phosphoribosylformylglycinamidine synthase	-
KC155_RS01545 (KC155_01545)	dprA	342699..343823 (+)	1125	WP_211600073.1	DNA-processing protein DprA	Machinery gene
KC155_RS01550 (KC155_01550)	-	343838..344728 (+)	891	WP_211600075.1	glycosyltransferase family 2 protein	-
KC155_RS01555 (KC155_01555)	-	344870..345067 (+)	198	WP_249134721.1	DUF1661 domain-containing protein	-
KC155_RS01560 (KC155_01560)	-	345324..345902 (+)	579	WP_004584770.1	putative peptidoglycan-binding domain-containing protein	-
KC155_RS01565 (KC155_01565)	-	346040..346633 (-)	594	WP_021664607.1	chromate transporter	-
KC155_RS01570 (KC155_01570)	-	346652..347209 (-)	558	WP_088443805.1	chromate transporter	-
KC155_RS01575 (KC155_01575)	gldN	347403..348482 (-)	1080	WP_211600078.1	gliding motility protein GldN	-

Sequence

Protein

• Length: 374 a.a.
• Molecular weight: 40530.39 Da
• Isoelectric Point: 5.4964

>NTDB_id=487173 KC155_RS01545 WP_211600073.1 342699..343823(+) (dprA) [Porphyromonas gingivalis strain LyG-1]
MDDRRPQLTEEQLLFRIALTHVKGVGSVLARQLLSAMGSPEAIFSDRKELVQRLPKAPRRLLDAIFSPSVMEEARRKLDQ
ALKAGLDMYFITDDNYPYRLKECVDAPILLYSKGNVDLSPRRVLSIVGTRNITAYGRTATERIVSGLAETIPDLLIVSGL
AYGVDVAAHKAALDNGLPTVAVLAHGLDRIYPSGHRSIAMEMLRNGGLLTDYPMGTEPERFNFVGRNRIVAGLSDATLVI
ESAEKGGSLITAGLAFGYNREVLALPGRATDSRSAGCNALIRDQKAALVSSAQDVLTLLDWSSTIDTKPQTLNFRPDSWP
DTPVAECLLRAGTASVDELTRATGLPINDVSAQLFDLELDGLVQSQPGGIYSVI

Nucleotide

• Length: 1125 bp

>NTDB_id=487173 KC155_RS01545 WP_211600073.1 342699..343823(+) (dprA) [Porphyromonas gingivalis strain LyG-1]
ATGGATGATCGTCGCCCCCAACTGACAGAGGAGCAACTGCTTTTCCGCATCGCACTCACGCATGTAAAAGGCGTGGGTAG
CGTGCTGGCAAGGCAGCTGCTTTCGGCTATGGGCAGTCCCGAAGCCATCTTTTCCGACAGGAAGGAGCTGGTACAGAGGC
TACCGAAAGCACCTCGCCGTCTGCTCGATGCCATCTTCTCTCCTTCGGTCATGGAGGAAGCACGCCGAAAGTTGGATCAA
GCCCTCAAAGCCGGTCTGGATATGTATTTCATCACCGATGATAACTATCCTTACCGCTTGAAAGAATGTGTCGATGCCCC
CATCCTTCTTTATTCCAAAGGCAATGTCGATCTCTCGCCACGTAGGGTGCTGAGCATTGTAGGTACGCGCAATATCACGG
CTTACGGACGTACAGCCACGGAGCGAATCGTATCGGGATTGGCTGAAACCATCCCCGATTTGCTTATCGTCAGCGGACTG
GCGTACGGCGTCGATGTCGCAGCTCATAAGGCCGCCTTGGATAATGGCTTGCCCACTGTAGCTGTATTGGCCCATGGATT
GGACAGGATTTATCCGAGCGGTCATCGTTCCATTGCTATGGAGATGCTCCGAAACGGAGGCTTGCTCACGGATTACCCTA
TGGGGACTGAACCGGAGCGATTCAATTTCGTCGGTCGCAATCGCATCGTAGCAGGCTTGTCGGATGCCACACTTGTGATC
GAATCGGCCGAAAAAGGAGGCTCCCTCATCACTGCCGGACTGGCATTCGGCTACAATCGCGAAGTACTGGCTCTACCCGG
ACGAGCCACGGATAGCCGTTCGGCCGGCTGCAATGCCTTGATAAGGGATCAAAAAGCCGCGCTTGTCAGCTCGGCTCAAG
ATGTGCTGACGCTGCTCGATTGGAGTTCTACCATAGACACCAAGCCTCAGACATTGAATTTCCGTCCCGATAGTTGGCCG
GATACCCCCGTAGCCGAATGTCTTCTCAGAGCAGGCACAGCCTCGGTGGACGAGCTGACACGCGCTACCGGACTACCTAT
AAACGATGTTTCTGCTCAGCTTTTCGACCTCGAATTGGACGGACTGGTACAGTCTCAGCCCGGTGGCATATACTCCGTTA
TATAA

Domains

Predicted by InterProScan.

• DprA winged helix domain (WHD_DprA) (328-369)

• DNA recombination-mediator protein A (DNA_processg_A) (83-289)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	37.027	98.93	0.366