Detailed information NTG0487150

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: KCI35_RS03990
• Genome accession: NZ_CP073348
• Coordinates: 930637..933540 (+)
• Length: 967 a.a.
• NCBI ID: WP_021679181.1
• Uniprot ID: -
• Organism: Porphyromonas gingivalis strain GMU202011
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 925637..938540

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KCI35_RS03970	-	926022..927362 (+)	1341	WP_211605266.1	T9SS type A sorting domain-containing protein	-
KCI35_RS03975	-	927600..928346 (+)	747	WP_004584269.1	ABC transporter permease	-
KCI35_RS03980	-	928365..929099 (+)	735	WP_088443338.1	ATP-binding cassette domain-containing protein	-
KCI35_RS03985	-	929194..930618 (+)	1425	WP_249158491.1	gliding motility-associated C-terminal domain-containing protein	-
KCI35_RS03990	uvrA	930637..933540 (+)	2904	WP_021679181.1	excinuclease ABC subunit UvrA	Machinery gene
KCI35_RS03995	-	933566..934945 (+)	1380	WP_004584273.1	SWIM zinc finger family protein	-
KCI35_RS04000	-	934945..937242 (+)	2298	WP_211605267.1	UvrD-helicase domain-containing protein	-

Sequence

Protein

• Length: 967 a.a.
• Molecular weight: 108102.93 Da
• Isoelectric Point: 7.0980

>NTDB_id=487150 KCI35_RS03990 WP_021679181.1 930637..933540(+) (uvrA) [Porphyromonas gingivalis strain GMU202011]
MHDTVINVKDKIARHDAVEVYGARVHNLKNIDVCIPRHSLTVITGMSGSGKSSLAFDTLFAEGQRRYIETFSAYARNFLG
GGMERPDVDEIKGLSPVISIEQKTTNRNPRSTVGTVTEVYDFFRLLYARVAEAYSYAGGKKMVKYTEEQIFHLILEKYDG
RKIALLAPVVRSRKGHYKELFERLRKKGYLHVRVDGEIREILHGMKLDRYKMHDVEVQIDKLCVASNQSKRIAESLALAM
REGEGLVMVLDSEKNEVGHFSRMMMCPDTGISYSDPAPHNFSFNSPHGYCPRCKGLGEVNLPDMDKIIPSREKSIYEGGI
EPLGKYKNNLFFWQIEALCEKYDVTIKTPLRDLPEELIEDILYGTDELLTINNKALGQSRYALSFDGVAKYILMQAEESD
ASATAQKWADQFLKTTTCPDCAGKRLNKEALSYRLAGKDIAEVNAMDIKTLIEWVDSLDEHLLDTQRAISIEILKEIRTR
LGFLKDVGLEYLTMNRAAASLSGGESQRIRLATQIGSKLVEVLYILDEPSIGLHQRDNLRLIHSLQDLRDIGNTVVVVEH
DQDMMLHADYVIDLGPRAGRHGGEVVFAGSPEEMVQANTLTADYISGRKRIEKSIGRRDGSGKTIKLFGAKGNNLQNIDV
IFPLGVFICVTGVSGSGKSTLINKTLFPAISQKLYRSLQDPMPYDRIEGLEHIDKIIAVDQSPIGRTLRSNAATYTGLFT
DIRALFVGLPESKARGYKPGRFSFNVKGGRCEVCKGNGYKTIEMNFLPDVFAPCEGCRGKRYNRETLEVRYKGKSIADVL
DMTINKAVEFFEHVPHILSKLSVLQEVGLGYIKLGQPSSTLSGGECQRVKLATELSKRDTGNTLYVLDEPTTGLHFEDVR
VLLGILNRLIERGNTVIVIEHNLDVIRCADYLIDIGPEGGAGGGQLLYQGKMEDIIECKNSYTAQFVKAEFEKGRIDTVH
MNSADNI

Nucleotide

• Length: 2904 bp

>NTDB_id=487150 KCI35_RS03990 WP_021679181.1 930637..933540(+) (uvrA) [Porphyromonas gingivalis strain GMU202011]
ATGCACGATACAGTTATAAACGTAAAAGACAAGATAGCTCGACACGATGCTGTGGAAGTCTATGGAGCACGGGTGCACAA
TCTGAAGAATATCGATGTGTGCATTCCGCGTCATAGCCTTACAGTCATCACGGGAATGAGTGGTAGCGGAAAGTCGTCAT
TGGCTTTCGATACCCTTTTTGCCGAAGGACAGCGACGGTACATAGAAACTTTTTCGGCTTATGCGCGGAATTTCCTCGGT
GGTGGTATGGAGCGCCCCGACGTGGACGAGATAAAAGGGCTGAGTCCGGTCATTTCCATAGAACAGAAGACGACCAATCG
GAATCCGAGATCGACTGTCGGTACCGTTACAGAGGTGTACGACTTCTTTCGTTTGCTCTATGCTCGTGTTGCTGAGGCTT
ATTCTTATGCCGGAGGAAAGAAGATGGTGAAATACACCGAGGAGCAAATCTTCCACCTCATTTTGGAAAAGTATGATGGC
CGTAAGATAGCTTTGTTAGCCCCGGTGGTTCGCTCGCGTAAGGGGCATTATAAGGAGCTATTCGAAAGGCTTCGTAAGAA
AGGCTATCTGCACGTACGCGTGGATGGTGAGATTCGCGAGATTTTGCATGGGATGAAGCTTGATCGCTATAAAATGCATG
ACGTCGAAGTGCAGATCGACAAGCTGTGCGTAGCATCGAATCAAAGCAAACGTATAGCGGAGAGCTTGGCACTGGCTATG
CGTGAAGGCGAAGGGCTTGTGATGGTGTTGGATTCGGAAAAAAACGAAGTGGGACATTTTAGTCGGATGATGATGTGTCC
TGATACGGGAATTTCGTATAGCGATCCGGCTCCGCACAATTTCAGTTTCAATTCCCCTCATGGCTATTGCCCGCGCTGTA
AGGGCTTGGGCGAAGTGAATCTGCCGGATATGGACAAGATCATTCCATCTCGTGAGAAGAGTATATACGAAGGTGGCATT
GAGCCATTGGGCAAATACAAAAACAATCTTTTCTTTTGGCAAATAGAGGCATTGTGCGAGAAGTATGATGTGACGATCAA
AACGCCTTTGCGCGATTTGCCGGAAGAGTTGATCGAGGATATCCTATATGGTACAGACGAACTACTGACCATAAACAACA
AAGCTTTGGGGCAGTCGAGGTATGCTCTCAGCTTCGATGGCGTGGCTAAGTATATATTGATGCAGGCAGAAGAATCGGAT
GCTTCGGCTACTGCGCAGAAATGGGCAGATCAGTTTCTCAAGACTACAACTTGCCCCGACTGTGCCGGCAAGCGTCTGAA
CAAAGAAGCTCTGTCCTATCGTTTGGCCGGCAAGGACATTGCAGAAGTGAATGCAATGGACATCAAGACTCTTATTGAAT
GGGTAGATTCTCTGGATGAACATCTCTTGGATACGCAACGGGCTATTTCTATAGAAATACTGAAAGAGATACGGACACGC
TTGGGGTTTCTTAAAGATGTGGGGTTGGAGTACTTGACGATGAACCGAGCTGCAGCATCCTTATCCGGAGGAGAAAGCCA
GCGTATTCGTTTGGCTACGCAGATCGGGAGCAAACTGGTTGAGGTCTTGTACATATTGGATGAACCGAGTATCGGTCTTC
ACCAAAGGGACAATCTTCGGTTGATTCATTCGCTTCAGGATTTGCGTGATATAGGCAATACAGTGGTAGTGGTGGAGCAT
GATCAGGATATGATGCTGCACGCCGACTATGTAATAGACTTAGGGCCACGAGCCGGCAGACATGGTGGTGAAGTGGTGTT
TGCAGGTAGTCCGGAAGAGATGGTGCAGGCTAATACCCTGACTGCCGATTATATAAGTGGACGAAAGCGTATAGAAAAGT
CGATCGGCAGGAGAGATGGTAGTGGGAAAACGATAAAATTATTTGGAGCCAAAGGCAATAACCTGCAGAATATAGACGTT
ATCTTTCCGCTGGGGGTATTTATATGTGTTACCGGGGTCTCCGGTAGTGGGAAAAGTACATTGATCAATAAGACTCTATT
CCCTGCTATCAGCCAAAAGCTGTACCGCTCTTTGCAGGATCCGATGCCCTACGACCGCATAGAGGGGTTAGAGCATATAG
ATAAGATAATAGCCGTAGACCAAAGCCCTATTGGGCGGACGCTTAGAAGCAATGCAGCCACATATACGGGATTGTTTACC
GATATTCGTGCTCTTTTTGTCGGTCTGCCCGAGAGTAAAGCTCGTGGATATAAGCCGGGGCGTTTTTCTTTCAACGTCAA
AGGCGGACGCTGTGAGGTTTGTAAGGGTAATGGCTACAAGACGATCGAAATGAATTTTTTGCCCGATGTATTTGCTCCGT
GTGAGGGATGCCGGGGAAAGCGATACAACAGGGAGACACTCGAAGTCCGTTACAAAGGAAAATCCATTGCGGATGTTTTG
GATATGACTATCAATAAGGCTGTCGAATTTTTCGAACATGTACCTCATATTTTATCCAAGCTTTCCGTTTTACAGGAGGT
CGGTTTGGGCTATATCAAACTGGGACAACCATCCTCGACTTTGTCGGGAGGAGAGTGTCAACGTGTTAAATTAGCCACCG
AGCTGAGTAAACGTGACACGGGAAATACACTCTATGTATTAGATGAACCGACTACGGGCTTACATTTCGAAGATGTACGC
GTTTTGTTGGGGATCCTTAATCGACTGATAGAGAGAGGGAATACGGTAATAGTGATCGAACATAATTTGGATGTGATCCG
CTGTGCGGATTATTTGATTGATATAGGACCGGAGGGAGGAGCAGGTGGTGGACAGTTGCTTTACCAAGGGAAAATGGAGG
ATATAATAGAATGCAAGAATAGTTATACAGCTCAATTTGTGAAAGCCGAATTCGAAAAAGGCCGGATTGATACTGTACAC
ATGAATTCTGCAGACAATATATAA

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (146-250)

• UvrA DNA-binding domain (UvrA_DNA-bind) (303-408)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	50.742	97.622	0.495
uvrA	Streptococcus pneumoniae TIGR4	50.742	97.622	0.495
uvrA	Streptococcus pneumoniae D39	50.742	97.622	0.495