Detailed information NTG0487098

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: D1J36_RS00260
• Genome accession: NZ_CP073239
• Coordinates: 59424..62249 (+)
• Length: 941 a.a.
• NCBI ID: WP_154136977.1
• Uniprot ID: -
• Organism: Riemerella anatipestifer strain RCAD0416
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 54424..67249

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D1J36_RS00245 (D1J36_000245)	-	55268..56407 (-)	1140	WP_154136975.1	acyl-CoA dehydrogenase	-
D1J36_RS00250 (D1J36_000250)	-	56532..58313 (+)	1782	WP_154136976.1	long-chain fatty acid--CoA ligase	-
D1J36_RS00255 (D1J36_000255)	-	58356..59300 (+)	945	WP_004918915.1	SPFH domain-containing protein	-
D1J36_RS00260 (D1J36_000260)	uvrA	59424..62249 (+)	2826	WP_154136977.1	excinuclease ABC subunit UvrA	Machinery gene
D1J36_RS00265 (D1J36_000265)	-	62274..62858 (+)	585	WP_004918918.1	outer membrane beta-barrel protein	-
D1J36_RS00270 (D1J36_000270)	purH	62878..64392 (+)	1515	WP_154136978.1	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	-
D1J36_RS00275 (D1J36_000275)	-	64693..65409 (-)	717	WP_154136979.1	endonuclease NucS domain-containing protein	-

Sequence

Protein

• Length: 941 a.a.
• Molecular weight: 105421.34 Da
• Isoelectric Point: 8.3153

>NTDB_id=487098 D1J36_RS00260 WP_154136977.1 59424..62249(+) (uvrA) [Riemerella anatipestifer strain RCAD0416]
MMKNRDFIEVYGAREHNLKNIDVKIPRNELVVITGLSGSGKSSLAFDTIFAEGQRRYIETFSAYARQFLGGLERPNVDKI
EGLSPVIAIEQKTTNKNPRSTVGTVTELYDFLRLLFARVSTAYSLETGKKLQSYTEEQILETIKEQYQNEKVLLLAPLVK
ARKGHYHELFVQLAKKGYSQARIDGTLQDIEYDLKLDRYKTHDIEVVIDRWIIGETASEARMQKSLSTALQMGGGVVMVQ
KYNSEEFQYFSKDLMDTATGQALPLPEPNTFSFNSPKGSCPHCKGLGTVKKINPDYLVTEPTLPFQSALLPLETYKFSKW
ALSQIKSILELFELSLLTPFNKIPKEALDYIYYGCDKEFVKDLKHAGISKKTKINFEGLIPHLEKVIEDKENYGATQVER
EFTVEEICTDCNGTRLKPESLAFKIEGKNIAEVNAMSLLDLKDWLSEIKNSFSEKNKIIAHEILKEIETRLGFLLDVGLE
YLSLNRSSKTLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNERLINSLKSLRDLGNSVLVVEHDKDMILEADE
VLDIGPKAGKYGGKVLWQGSPKDLIKADTITADYLTGRRKIEIPKKRREGNGNAIILKGATGNNLKNVTLKIPLGKMVVV
TGISGSGKSSLINGTLYPILNRHFYRAVQEPLPYKKIEGIEHIDKIVDVDQTPIGRTPRSNPATYTGVFSDIRTLFANLP
ESKIRGYKAGRFSFNVKGGRCETCQGGGLKVIEMNFLPDVYVHCETCNGKRFNRETLEVRYKGKSISDVLDMTIDEAVEF
FQPIPKIYSKVKTLQEVGLGYITLGQQSTTLSGGEAQRVKLATELSKKQTGKTLYILDEPTTGLHFEDVKILMEVIQKLV
DLGNSFIIIEHNMDVIKLADHIIDVGPEGGKNGGSIVAEGTPEEIIKNKKSITGKFLKKEM

Nucleotide

• Length: 2826 bp

>NTDB_id=487098 D1J36_RS00260 WP_154136977.1 59424..62249(+) (uvrA) [Riemerella anatipestifer strain RCAD0416]
ATGATGAAAAATAGAGATTTCATAGAGGTCTATGGTGCTAGAGAGCATAACCTAAAAAACATTGATGTTAAAATTCCTCG
TAACGAGTTAGTCGTTATTACAGGGCTATCAGGAAGTGGGAAATCTTCTTTAGCATTTGATACTATTTTTGCAGAAGGAC
AAAGGCGTTATATAGAAACATTTTCTGCCTATGCTCGGCAATTTCTCGGCGGATTAGAACGCCCCAATGTCGATAAAATA
GAAGGACTTTCACCTGTTATCGCTATTGAACAAAAAACCACTAATAAAAACCCTCGTTCTACCGTAGGGACGGTTACAGA
ACTTTATGATTTTCTCAGACTTCTATTTGCTAGAGTTTCCACAGCTTATTCCTTAGAAACAGGTAAAAAGCTACAAAGCT
ATACCGAAGAGCAAATTTTAGAAACCATCAAAGAACAATATCAGAATGAAAAAGTCTTGCTTCTAGCACCACTAGTAAAG
GCTAGAAAGGGGCATTATCACGAGCTTTTTGTGCAATTAGCCAAAAAAGGATATTCCCAAGCAAGAATAGACGGCACTTT
GCAAGATATAGAATACGACCTTAAACTAGACCGATACAAAACCCACGATATAGAAGTAGTTATAGACCGTTGGATTATAG
GCGAAACCGCATCTGAAGCTAGAATGCAAAAATCACTTTCCACAGCTTTGCAGATGGGGGGCGGTGTGGTTATGGTTCAA
AAATATAATTCGGAAGAGTTTCAGTATTTTTCTAAAGATTTAATGGATACCGCCACAGGACAGGCTCTACCATTACCAGA
ACCAAATACTTTTTCGTTCAATTCTCCTAAAGGGAGTTGTCCTCATTGTAAAGGTTTGGGAACTGTAAAAAAAATCAATC
CTGATTATCTAGTTACCGAGCCTACTCTACCCTTTCAGTCGGCACTATTACCATTAGAAACTTATAAATTTAGTAAGTGG
GCTTTATCCCAAATTAAAAGCATACTAGAGTTATTTGAGCTTAGCTTACTAACACCATTCAACAAAATTCCTAAAGAAGC
CTTAGACTACATCTATTACGGTTGTGATAAAGAGTTTGTAAAAGATTTAAAACACGCTGGAATTTCCAAAAAAACTAAAA
TTAACTTTGAAGGGCTAATCCCTCATTTAGAAAAAGTTATAGAAGATAAAGAGAACTACGGTGCTACACAAGTGGAGCGA
GAGTTTACAGTAGAAGAAATCTGTACGGACTGTAACGGAACAAGATTAAAACCCGAAAGTTTAGCCTTTAAAATAGAAGG
TAAGAATATAGCTGAAGTTAATGCGATGAGCTTATTAGACTTAAAGGATTGGCTTTCGGAAATAAAAAATAGCTTTAGCG
AAAAAAACAAAATTATCGCCCACGAAATTTTAAAAGAGATAGAAACTCGTTTGGGCTTTCTGCTAGATGTAGGACTAGAA
TATCTTAGCCTTAACAGAAGTAGCAAGACCCTTTCTGGAGGTGAGTCTCAAAGAATTCGTTTGGCAACTCAGATAGGTTC
GCAGTTAGTAAATGTGCTTTATATTTTAGACGAACCTTCTATTGGGCTTCATCAGAGAGATAACGAAAGGCTCATCAACT
CTTTAAAAAGTTTACGAGATTTAGGAAACTCAGTTCTTGTGGTAGAGCATGATAAAGATATGATTTTAGAAGCCGATGAG
GTGCTAGACATTGGACCTAAAGCGGGTAAGTATGGCGGAAAAGTCTTGTGGCAAGGCAGCCCAAAAGATTTAATAAAAGC
TGATACCATTACAGCAGATTACCTCACAGGAAGAAGAAAAATAGAAATCCCTAAAAAAAGAAGAGAAGGCAACGGTAACG
CTATTATTCTCAAAGGAGCTACGGGCAATAATCTTAAAAATGTAACCCTAAAAATTCCTTTAGGGAAAATGGTAGTTGTT
ACTGGTATTTCAGGAAGCGGAAAATCCTCACTGATTAACGGAACCCTTTACCCTATTCTCAACCGTCATTTTTATCGTGC
TGTGCAAGAGCCTCTACCATACAAAAAAATAGAAGGTATAGAGCATATAGACAAAATAGTAGATGTAGACCAAACGCCAA
TCGGTAGAACGCCTCGTTCTAATCCTGCCACTTATACAGGTGTATTTTCGGATATCCGAACCTTGTTCGCTAACCTTCCA
GAAAGTAAAATCAGAGGTTATAAGGCAGGGAGATTTTCGTTTAATGTTAAAGGCGGACGCTGCGAAACTTGTCAAGGAGG
TGGATTGAAAGTGATTGAAATGAATTTCTTGCCTGATGTCTATGTGCATTGCGAAACTTGCAACGGCAAACGCTTTAATA
GAGAAACTTTAGAAGTAAGATATAAAGGTAAATCTATATCCGATGTCCTAGATATGACCATAGACGAGGCTGTAGAATTT
TTTCAGCCAATCCCAAAAATCTATTCTAAGGTAAAAACGCTACAAGAAGTTGGTTTAGGTTATATTACCTTAGGACAACA
ATCTACTACACTTTCGGGCGGAGAGGCTCAAAGGGTAAAATTAGCCACAGAACTCTCTAAAAAACAAACAGGTAAAACAC
TTTATATTTTAGATGAACCTACCACAGGACTGCATTTTGAAGATGTCAAGATACTGATGGAGGTTATCCAAAAGCTAGTA
GATTTAGGGAACTCCTTTATCATTATTGAACATAATATGGATGTGATAAAACTTGCCGACCATATTATAGATGTAGGTCC
AGAAGGTGGTAAAAATGGAGGGAGCATTGTAGCAGAAGGCACTCCAGAAGAAATTATAAAGAATAAAAAATCTATCACAG
GTAAATTTTTGAAAAAAGAAATGTAG

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (294-391)

• UvrA interaction domain (UvrA_inter) (135-241)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	51.483	100	0.516
uvrA	Streptococcus pneumoniae TIGR4	51.483	100	0.516
uvrA	Streptococcus pneumoniae D39	51.483	100	0.516