Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   JNUCC41_RS07170 Genome accession   NZ_CP062163
Coordinates   1428075..1429025 (-) Length   316 a.a.
NCBI ID   WP_192207023.1    Uniprot ID   -
Organism   Brevibacillus sp. JNUCC-41     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1423075..1434025
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JNUCC41_RS07155 (JNUCC41_07155) - 1425229..1426176 (-) 948 WP_286182399.1 siderophore ABC transporter substrate-binding protein -
  JNUCC41_RS07160 (JNUCC41_07160) - 1426383..1427141 (-) 759 WP_192207020.1 ABC transporter ATP-binding protein -
  JNUCC41_RS07165 (JNUCC41_07165) - 1427135..1428082 (-) 948 WP_192207021.1 iron chelate uptake ABC transporter family permease subunit -
  JNUCC41_RS07170 (JNUCC41_07170) ceuB 1428075..1429025 (-) 951 WP_192207023.1 ABC transporter permease Machinery gene
  JNUCC41_RS07175 (JNUCC41_07175) - 1429291..1429632 (+) 342 WP_192207025.1 DUF1450 domain-containing protein -
  JNUCC41_RS07180 (JNUCC41_07180) - 1429852..1431501 (+) 1650 WP_192207027.1 M14 family metallocarboxypeptidase -
  JNUCC41_RS07185 (JNUCC41_07185) shc 1431671..1433566 (+) 1896 WP_228467563.1 squalene--hopene cyclase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34976.27 Da        Isoelectric Point: 9.5025

>NTDB_id=486650 JNUCC41_RS07170 WP_192207023.1 1428075..1429025(-) (ceuB) [Brevibacillus sp. JNUCC-41]
MKIRYLVMALIVLSFTSLFIGVKDITPLDLLDLSDDKVQIMLQSRFPRMVTIVIAGIVMSISGLIMQQLSRNKFVSPTTA
GTMDSARLGLLLAIIIFPSAALIEKMAFAFIFALAGTFLFMKILDQVKYKDTIFIPLVGLMFGNIVGSISTFFAYKYDLI
QSLNTWMNGDFSMIMSGRYELIYVSIPLVILAYFFANKFTVAGMGEEFAINLGINYKFIVNFGLIIVALSSTVVLLTVGT
IPFIGLIVPNIVSLYLGDNLKKSLSHTALLGAVFLLFCDILGRILIYPFEIPIGLVVGVIGSAIFIYLILRRKAYE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=486650 JNUCC41_RS07170 WP_192207023.1 1428075..1429025(-) (ceuB) [Brevibacillus sp. JNUCC-41]
ATGAAGATAAGATATTTAGTCATGGCGTTAATTGTTTTATCATTTACGTCATTATTCATTGGTGTAAAAGATATTACTCC
CCTGGATTTATTGGATTTAAGTGATGATAAAGTGCAAATCATGCTGCAAAGCCGTTTCCCTAGAATGGTGACCATAGTCA
TTGCCGGTATCGTGATGAGCATAAGCGGTCTGATCATGCAGCAATTGAGCCGCAATAAATTTGTATCCCCGACGACTGCC
GGAACCATGGATTCTGCACGGCTTGGACTTCTTCTTGCCATTATCATTTTTCCATCGGCAGCACTTATTGAGAAAATGGC
ATTCGCTTTCATATTCGCTTTGGCAGGTACATTCTTGTTCATGAAAATTCTTGATCAAGTGAAATATAAGGATACGATTT
TCATTCCATTGGTTGGTTTGATGTTTGGGAATATCGTCGGATCCATCTCGACTTTCTTTGCCTATAAATATGATTTGATT
CAAAGCCTCAACACATGGATGAATGGAGATTTCTCGATGATCATGTCGGGAAGGTACGAACTTATATATGTAAGTATCCC
TCTAGTCATTCTCGCATACTTCTTTGCCAATAAATTCACTGTGGCAGGGATGGGTGAAGAGTTTGCCATCAATCTAGGAA
TCAATTATAAGTTTATAGTCAATTTTGGGTTGATCATCGTGGCATTATCCTCCACTGTCGTTTTGTTAACGGTGGGAACG
ATTCCTTTCATAGGATTGATCGTACCGAATATTGTATCCCTTTACCTTGGTGACAATTTGAAAAAGAGTCTTTCTCATAC
AGCATTGCTAGGGGCCGTATTCCTATTGTTCTGCGATATTCTGGGCAGGATCCTCATATATCCATTTGAAATCCCGATCG
GACTCGTGGTTGGTGTGATAGGAAGCGCCATATTTATCTATCTGATACTGAGGAGAAAGGCATATGAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.633

100

0.506