Detailed information NTG0486634

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: IGX38_RS20275
• Genome accession: NZ_CP062162
• Coordinates: 4314033..4315331 (-)
• Length: 432 a.a.
• NCBI ID: WP_242100372.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain 2020WEIHUA_G
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4309033..4320331

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IGX38_RS20255 (IGX38_20215)	-	4310026..4311231 (-)	1206	WP_106442149.1	ISL3 family transposase	-
IGX38_RS20260 (IGX38_20220)	rpoH	4311384..4312238 (-)	855	WP_011914994.1	RNA polymerase sigma factor RpoH	-
IGX38_RS20265 (IGX38_20225)	ftsX	4312349..4313368 (-)	1020	WP_011914995.1	permease-like cell division protein FtsX	-
IGX38_RS20270 (IGX38_20230)	ftsE	4313368..4314036 (-)	669	WP_011914996.1	cell division ATP-binding protein FtsE	-
IGX38_RS20275 (IGX38_20235)	pilA	4314033..4315331 (-)	1299	WP_242100372.1	signal recognition particle-docking protein FtsY	Machinery gene
IGX38_RS20280 (IGX38_20240)	-	4315559..4316911 (+)	1353	WP_242100373.1	M16 family metallopeptidase	-
IGX38_RS20285 (IGX38_20245)	-	4316904..4318445 (+)	1542	WP_014598017.1	M16 family metallopeptidase	-
IGX38_RS20290 (IGX38_20250)	rsmD	4318445..4319062 (+)	618	WP_242100374.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
IGX38_RS20295 (IGX38_20255)	-	4319056..4319460 (-)	405	WP_185776080.1	ribonucleotide reductase subunit alpha	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 46120.37 Da
• Isoelectric Point: 4.5702

>NTDB_id=486634 IGX38_RS20275 WP_242100372.1 4314033..4315331(-) (pilA) [Stutzerimonas stutzeri strain 2020WEIHUA_G]
MFGSNDDKKTPAEPGEKKGLFGWLRKKPQPASAEQPATEPQADSEPVEQTVANVETPAATPQHEEPRAVEADLQPTEVIK
SPPPDPEPEPEPEPEPEPEPEPEPEPEPVSAPVVAATPEAPAKLGFFARLRQGLSKTSASIGEGMASLFLGKKAIDDDLL
DELETRLLTADVGVEATTAIMQNLTRRVSRKELADSGALYTALQEELVGLLKPVEQPLAIDAGKRPYVILVVGVNGVGKT
TTIGKLAKKLQLDGKKVMLAAGDTFRAAAVEQLQVWGERNGIPVIAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRL
HTKDNLMEELKKVRRVMGKLDESAPHEVLLVLDAGTGQNAINQTRQFNQAVELTGLALTKLDGTAKGGVIFALAKQFGTP
IRYIGVGEGIDDLRTFEADAFVKALFAQREDA

Nucleotide

• Length: 1299 bp

>NTDB_id=486634 IGX38_RS20275 WP_242100372.1 4314033..4315331(-) (pilA) [Stutzerimonas stutzeri strain 2020WEIHUA_G]
ATGTTTGGTTCCAACGACGACAAGAAGACGCCGGCCGAGCCCGGCGAGAAGAAAGGCCTGTTCGGCTGGCTGCGCAAGAA
GCCCCAGCCCGCTTCGGCAGAGCAGCCGGCCACCGAGCCTCAAGCGGACAGCGAACCGGTCGAGCAGACCGTGGCGAATG
TCGAAACGCCTGCCGCCACGCCGCAGCATGAGGAGCCTCGCGCCGTCGAGGCCGATCTGCAGCCGACCGAGGTGATCAAG
TCGCCGCCGCCAGACCCTGAACCCGAACCCGAACCCGAACCCGAACCCGAACCCGAACCCGAACCCGAACCAGAGCCCGA
GCCGGTATCTGCCCCGGTCGTTGCGGCCACGCCGGAAGCGCCGGCCAAGCTCGGCTTTTTCGCTCGCCTGCGCCAGGGTC
TGTCGAAGACCAGCGCCAGCATCGGCGAAGGCATGGCCAGCCTGTTCCTCGGCAAGAAGGCCATCGACGACGATCTGCTC
GACGAACTGGAAACCCGCCTGCTGACCGCCGACGTCGGCGTCGAGGCGACCACCGCCATCATGCAGAACCTCACCCGGCG
CGTCTCGCGCAAGGAGCTGGCCGACAGCGGCGCGCTCTACACCGCGCTGCAGGAGGAGCTCGTCGGTCTGCTCAAGCCGG
TCGAGCAGCCGCTGGCGATCGATGCCGGCAAGCGTCCCTACGTGATCCTGGTGGTCGGCGTGAACGGCGTCGGCAAGACC
ACCACCATCGGCAAGCTGGCCAAGAAACTGCAACTCGACGGCAAGAAGGTCATGCTCGCCGCCGGTGACACCTTCCGCGC
CGCAGCGGTGGAGCAGCTGCAGGTGTGGGGCGAGCGCAACGGCATCCCGGTGATCGCCCAGCACACCGGCGCGGATTCCG
CCTCGGTGATCTTCGATGCCGTGCAGGCCGCCAAGGCACGCGGCATCGACGTGCTGATCGCCGACACCGCCGGCCGACTG
CACACCAAGGACAACCTGATGGAAGAGCTGAAGAAGGTCCGCCGGGTGATGGGCAAGCTCGACGAGTCGGCGCCACACGA
GGTGCTGCTGGTGCTCGATGCCGGCACCGGACAGAACGCCATCAACCAGACCCGCCAGTTCAACCAGGCGGTCGAGCTGA
CCGGGCTTGCGCTGACCAAGCTCGACGGCACCGCCAAGGGCGGCGTGATCTTCGCCCTGGCCAAGCAGTTCGGCACGCCG
ATCCGCTACATCGGCGTAGGCGAAGGCATCGACGATCTGCGCACCTTCGAGGCCGATGCCTTCGTCAAGGCGCTGTTCGC
TCAGCGGGAAGACGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (227-426)

• SRP54-type protein, helical bundle domain (SRP54_N) (142-207)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.761	96.759	0.481