Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   H7691_RS14220 Genome accession   NZ_CP062156
Coordinates   3047377..3047778 (-) Length   133 a.a.
NCBI ID   WP_054667142.1    Uniprot ID   -
Organism   Stenotrophomonas sp. CW117     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3042377..3052778
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7691_RS14205 (H7691_14205) - 3044390..3046426 (-) 2037 WP_054667137.1 methyl-accepting chemotaxis protein -
  H7691_RS14210 (H7691_14210) - 3046468..3046998 (-) 531 WP_054667139.1 chemotaxis protein CheW -
  H7691_RS14215 (H7691_14215) - 3046998..3047360 (-) 363 WP_054667141.1 response regulator -
  H7691_RS14220 (H7691_14220) pilG 3047377..3047778 (-) 402 WP_054667142.1 twitching motility response regulator PilG Regulator
  H7691_RS14225 (H7691_14225) gshB 3048026..3048976 (+) 951 WP_056931286.1 glutathione synthase -
  H7691_RS14230 (H7691_14230) - 3048973..3049863 (+) 891 WP_056931285.1 energy transducer TonB -
  H7691_RS14235 (H7691_14235) - 3049903..3051849 (-) 1947 WP_056931284.1 prolyl oligopeptidase family serine peptidase -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14644.06 Da        Isoelectric Point: 6.3482

>NTDB_id=486543 H7691_RS14220 WP_054667142.1 3047377..3047778(-) (pilG) [Stenotrophomonas sp. CW117]
MVENMAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=486543 H7691_RS14220 WP_054667142.1 3047377..3047778(-) (pilG) [Stenotrophomonas sp. CW117]
ATGGTTGAAAACATGGCTGCGGGTGGGGAACTCGCAGGGTTGAAGGTGATGGTCATCGACGATTCGAAAACCATCCGCCG
CACCGCCGAGACACTGCTCAAGCGCGAGGGCTGCGAGGTCGTGACCGCGACCGACGGTTTCGAGGCATTGGCCAAGATCG
CCGACCAGCAGCCGCAGATCATCTTCGTCGACATCATGATGCCGCGGCTGGATGGCTATCAGACCTGCGCGCTGATCAAG
GGCAACCAGCTGTTCAAGTCCACGCCGGTGATCATGCTGTCCTCCAAGGATGGCCTGTTCGACAAGGCGCGCGGGCGCAT
CGTCGGCTCCGAGCAGTACCTGACCAAGCCTTTCACCCGCGAAGAACTGCTGGGCGCCATCCGTACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684