Detailed information NTG0486471

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: KBU60_RS01870
• Genome accession: NZ_CP073068
• Coordinates: 396139..398961 (-)
• Length: 940 a.a.
• NCBI ID: WP_140288117.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain FB-11
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 391139..403961

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KBU60_RS01860 (KBU60_01860)	-	393053..394174 (+)	1122	WP_212569296.1	alanine--glyoxylate aminotransferase family protein	-
KBU60_RS01865 (KBU60_01865)	-	394293..396071 (-)	1779	WP_140288106.1	PglL family O-oligosaccharyltransferase	-
KBU60_RS01870 (KBU60_01870)	uvrA	396139..398961 (-)	2823	WP_140288117.1	excinuclease ABC subunit UvrA	Machinery gene
KBU60_RS01875 (KBU60_01875)	galU	399099..399971 (-)	873	WP_005466627.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
KBU60_RS01880 (KBU60_01880)	qstR	400229..400873 (-)	645	WP_005480993.1	LuxR C-terminal-related transcriptional regulator	Regulator
KBU60_RS01885 (KBU60_01885)	ssb	401152..401682 (+)	531	WP_140288107.1	single-stranded DNA-binding protein	Machinery gene
KBU60_RS01890 (KBU60_01890)	csrD	401923..403932 (+)	2010	WP_025541503.1	RNase E specificity factor CsrD	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 103812.13 Da
• Isoelectric Point: 6.5710

>NTDB_id=486471 KBU60_RS01870 WP_140288117.1 396139..398961(-) (uvrA) [Vibrio parahaemolyticus strain FB-11]
MDKIEVRGARTHNLKDINLTIPRDKLTVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPTHHAPLAAQTVSQMVDKVLGLPEGSKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLSDPPTLELHKKHTIEVVVDRFKVRPDLQQRLAESFETTLELSGGIAVIAPMDGD
GEEIIFSANFACPQCGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPSRVIQDDSLSLAQGAIRGWDQKNYYYFQML
TSLADHYGFDLHAPFNSLPKKTQDVILKGSGRTEIEFKYINDRGDIRVKRHPFEGILNTLERRYRDTESISVREELAKYI
STKSCSSCGGTRLRLEARNVFIADTTLPEIVELSIADALTFFQTLKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGNVVAEGTMDEIIANPNSLTGQYLSGAKEIAVPKERTPRDPKKTVELLGATGNNLKNVDLSIPVGLFSCITGV
SGSGKSTLINDTFFKIAHTQLNGATTAHPSPYKSIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYKGKTIDEVLEMTVEDARTFFD
PVPAIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVSQIEGSHTARFLKPMLK

Nucleotide

• Length: 2823 bp

>NTDB_id=486471 KBU60_RS01870 WP_140288117.1 396139..398961(-) (uvrA) [Vibrio parahaemolyticus strain FB-11]
ATGGATAAAATAGAAGTTCGCGGTGCCCGAACCCATAACCTCAAAGATATCAATCTGACTATTCCTCGCGATAAACTGAC
AGTAATTACTGGGTTAAGCGGCTCCGGTAAGTCCTCTCTCGCATTCGATACCTTATATGCAGAAGGCCAACGACGTTATG
TCGAATCACTGTCTGCTTATGCTCGTCAGTTTTTGTCTCTTATGGAAAAACCAGATGTCGACCATATCGAAGGTTTATCA
CCGGCGATTTCTATTGAACAAAAATCGACATCTCATAACCCTCGCTCAACCGTCGGTACCATCACCGAAGTTTACGACTA
CTTACGTCTGCTTTACGCTCGTGTTGGTGAACCACGCTGTCCTACTCACCACGCCCCATTAGCCGCACAAACTGTCAGCC
AGATGGTGGATAAAGTATTGGGACTGCCAGAAGGCAGTAAAATGATGCTGCTTGCTCCAATCGTAAAAGAGCGCAAAGGT
GAGCATGTAAAAACACTAGAAAACCTTGCCGCACAAGGTTTTATTCGAGCGCGTATTGACGGCGAAACTTGCGATCTTTC
AGATCCACCAACACTTGAGCTACACAAAAAACACACCATTGAAGTCGTGGTCGACCGATTCAAAGTTCGCCCAGATCTGC
AACAACGTTTAGCAGAGTCATTTGAGACGACGCTAGAGCTTTCTGGTGGTATTGCGGTGATTGCTCCGATGGATGGCGAT
GGGGAAGAAATCATCTTTTCAGCGAACTTCGCTTGTCCGCAATGTGGCTACAGCATGCAAGAGCTGGAACCGAGATTGTT
CTCATTTAACAACCCAGCAGGCGCGTGTGGAACTTGTGATGGCTTGGGTGTACAACAGTATTTTGATCCAAGCCGAGTGA
TTCAAGATGACTCACTCAGTTTGGCACAAGGTGCCATTCGTGGTTGGGATCAAAAGAATTACTATTACTTCCAAATGCTG
ACTTCATTGGCGGATCATTATGGATTTGATTTGCATGCTCCGTTCAACTCTCTGCCAAAGAAAACGCAAGACGTTATTCT
CAAAGGCTCAGGCCGCACCGAGATCGAGTTTAAATACATCAATGATCGCGGCGACATTCGTGTAAAGCGCCACCCATTCG
AAGGGATTTTAAATACGCTTGAACGTCGTTACCGCGATACCGAGTCCATCTCAGTTCGAGAAGAGTTGGCTAAATACATC
TCGACAAAATCATGCTCAAGCTGTGGCGGTACTCGTCTACGCCTTGAAGCACGTAATGTATTTATTGCCGATACTACCTT
ACCTGAGATCGTTGAGCTCAGTATTGCAGATGCCCTTACCTTCTTCCAAACACTCAAGCTAGAAGGTCAACGTGCACAAA
TCGCAGAAAAGGTCATGAAGGAGATCAATGATCGTCTACAGTTCCTTGTAAATGTGGGCTTGAACTACCTTAATTTATCC
CGAAGTGCAGAGACGCTATCCGGTGGCGAAGCACAACGCATTCGCTTAGCGAGCCAAATTGGTGCAGGTCTTGTTGGTGT
CATGTACGTATTAGATGAACCGTCGATTGGCCTCCACCAGCGTGATAACGAACGACTCCTAAAAACACTGACTCATTTGC
GCGATTTAGGTAATACCGTACTCGTGGTAGAACACGATGAAGATGCCATTCGCTGTGCCGACCACGTGATTGATATTGGC
CCGGGAGCAGGGGTACACGGCGGTAATGTGGTTGCTGAGGGAACCATGGATGAGATCATCGCCAACCCGAACTCTCTCAC
AGGTCAGTATCTAAGTGGCGCAAAAGAGATAGCAGTCCCTAAAGAGCGTACCCCTCGCGATCCAAAGAAAACCGTCGAGC
TACTAGGCGCAACAGGTAACAACCTGAAGAACGTCGACTTGTCTATTCCTGTCGGATTGTTTAGCTGTATTACTGGCGTG
TCTGGCTCCGGTAAATCAACGTTGATTAACGATACGTTTTTCAAAATTGCACACACCCAGCTCAATGGCGCTACTACTGC
ACACCCATCGCCTTATAAGTCGATTAAAGGTCTAGAACATTTCGATAAGGTTATCGACATCGATCAAAGCCCAATTGGCC
GAACACCACGCTCGAACCCTGCGACGTACACGGGAATCTTTACCCCTATTCGCGAGCTGTTTGCTGGTACGCAGGAATCA
CGTTCACGTGGTTACAAACCTGGCCGCTTTAGTTTTAACGTTCGAGGTGGTCGCTGTGAAGCTTGTCAGGGGGATGGTGT
TATCAAAGTCGAGATGCACTTCTTACCAGACGTGTACGTGCCATGTGATGTGTGTAAAGGGAAGCGCTATAACCGCGAAA
CACTGGAAGTACGCTACAAAGGCAAAACCATCGATGAAGTACTGGAAATGACCGTCGAGGATGCTCGCACCTTCTTCGAT
CCTGTTCCTGCGATTGCCCGCAAGCTGCAAACTCTAATGGACGTTGGTCTGTCTTACATTCGTTTAGGTCAAGCGGCAAC
CACATTATCAGGCGGCGAAGCGCAGAGAGTGAAATTGGCAAGAGAGCTATCCAAGCGTGATACGGGTAAAACCTTGTACA
TTCTGGATGAGCCAACAACTGGTCTGCACTTCCATGATATTCAGCAGCTATTGACCGTACTTCATCGCCTGCGCGATCAC
GGGAATACCGTTGTGGTTATCGAGCATAACTTGGACGTCATCAAAACAGCAGACTGGATCATCGACTTAGGACCAGAAGG
CGGACAAGGCGGCGGAGAGATCATTGCCCAGGGAACACCAGAAGATGTGTCTCAGATCGAAGGTTCGCACACAGCTCGAT
TCCTTAAGCCTATGTTGAAATAG

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-398)

• ABC transporter (ABC_tran) (622-859)

• UvrA interaction domain (UvrA_inter) (130-237)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.749	100	0.579
uvrA	Streptococcus pneumoniae TIGR4	57.749	100	0.579
uvrA	Streptococcus pneumoniae D39	57.749	100	0.579