Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   TL13_RS04135 Genome accession   NC_021213
Coordinates   835803..836285 (-) Length   160 a.a.
NCBI ID   WP_012028247.1    Uniprot ID   A0A0H3MUQ1
Organism   Streptococcus suis TL13     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 830803..841285
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  TL13_RS04110 (TL13_0813) pheT 831014..833413 (+) 2400 WP_015646752.1 phenylalanine--tRNA ligase subunit beta -
  TL13_RS04115 (TL13_0814) - 833566..833832 (+) 267 WP_015646753.1 DUF2087 domain-containing protein -
  TL13_RS04120 (TL13_0815) - 833853..834155 (-) 303 WP_015646754.1 hypothetical protein -
  TL13_RS04125 (TL13_0816) - 834348..835091 (+) 744 WP_015646755.1 polyphosphate polymerase domain-containing protein -
  TL13_RS04130 (TL13_0817) - 835078..835755 (+) 678 WP_024389292.1 DUF4956 domain-containing protein -
  TL13_RS04135 (TL13_0818) mutX 835803..836285 (-) 483 WP_012028247.1 NUDIX hydrolase Machinery gene
  TL13_RS04140 (TL13_0819) folE 836452..837015 (+) 564 WP_002938082.1 GTP cyclohydrolase I FolE -
  TL13_RS04145 (TL13_0820) folP 837024..837836 (+) 813 WP_015646757.1 dihydropteroate synthase -
  TL13_RS04150 (TL13_0821) folB 837829..838191 (+) 363 WP_012027113.1 dihydroneopterin aldolase -
  TL13_RS04155 folK 838188..838676 (+) 489 WP_024395904.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  TL13_RS04160 (TL13_0822) - 838727..840037 (+) 1311 WP_012775168.1 GntP family permease -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18554.91 Da        Isoelectric Point: 4.4960

>NTDB_id=48639 TL13_RS04135 WP_012028247.1 835803..836285(-) (mutX) [Streptococcus suis TL13]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREIFEETGLTVTKHALKGVITFPDF
TPNTDWYTYVFKITGFEGSLIDCNEGDLEWVPYDQVLSKPTWEGDRHFQEWLLEDKPFFSACFRYDGDKLLDYSVDFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=48639 TL13_RS04135 WP_012028247.1 835803..836285(-) (mutX) [Streptococcus suis TL13]
ATGACCAAGAAACCCGTCCAACTCGCTACCATTTGCTACATTGATAATGGCAAGGAATTTCTCCTGCTCCATCGCAATAA
AAAAGAAAATGATGTCCATCAAGGGAAATGGATTGGGGTCGGTGGTAAGCTGGAACCCGGTGAAACACCGCAGGCTTGTG
CCATTCGAGAAATCTTTGAGGAAACTGGGCTTACTGTAACAAAGCATGCTCTAAAAGGAGTGATAACCTTCCCAGACTTT
ACTCCAAACACAGACTGGTACACCTATGTCTTTAAGATAACTGGTTTTGAAGGAAGTTTGATCGATTGCAACGAAGGCGA
TTTAGAATGGGTTCCTTATGACCAAGTCTTGTCCAAACCAACTTGGGAGGGCGACCGGCATTTTCAAGAATGGCTATTAG
AGGACAAACCATTTTTTTCCGCTTGCTTCCGCTATGATGGGGACAAACTGCTTGATTATAGTGTTGATTTTTATGAAGAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3MUQ1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

81.699

95.625

0.781

Multiple sequence alignment