Detailed information NTG0485978

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: JAB4_RS05900
• Genome accession: NZ_CP062062
• Coordinates: 1291527..1292582 (-)
• Length: 351 a.a.
• NCBI ID: WP_070222514.1
• Uniprot ID: -
• Organism: Janthinobacterium sp. HH102
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1286527..1297582

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JAB4_RS05870 (JAB4_011590)	-	1287220..1287567 (+)	348	WP_070222526.1	antibiotic biosynthesis monooxygenase	-
JAB4_RS05875 (JAB4_011600)	-	1287564..1288016 (-)	453	WP_070222524.1	hypothetical protein	-
JAB4_RS05880 (JAB4_011610)	-	1288198..1288464 (+)	267	WP_070222522.1	hypothetical protein	-
JAB4_RS05885 (JAB4_011620)	rpoH	1288554..1289453 (-)	900	WP_170932923.1	RNA polymerase sigma factor RpoH	-
JAB4_RS05890 (JAB4_011630)	ftsX	1289858..1290778 (-)	921	WP_070222518.1	permease-like cell division protein FtsX	-
JAB4_RS05895 (JAB4_011640)	-	1290775..1291518 (-)	744	WP_070222516.1	ATP-binding cassette domain-containing protein	-
JAB4_RS05900 (JAB4_011650)	pilA	1291527..1292582 (-)	1056	WP_070222514.1	signal recognition particle-docking protein FtsY	Machinery gene
JAB4_RS05905 (JAB4_011660)	-	1292747..1293688 (-)	942	WP_070222512.1	MerR family transcriptional regulator	-
JAB4_RS05910 (JAB4_011670)	-	1293893..1295206 (+)	1314	WP_070222510.1	FAD-dependent oxidoreductase	-
JAB4_RS05915 (JAB4_011680)	-	1295196..1295993 (+)	798	WP_070222508.1	DUF1365 domain-containing protein	-
JAB4_RS05920 (JAB4_011690)	-	1296074..1297237 (+)	1164	WP_083287245.1	cyclopropane-fatty-acyl-phospholipid synthase family protein	-

Sequence

Protein

• Length: 351 a.a.
• Molecular weight: 37327.62 Da
• Isoelectric Point: 6.8952

>NTDB_id=485978 JAB4_RS05900 WP_070222514.1 1291527..1292582(-) (pilA) [Janthinobacterium sp. HH102]
MFSFFKKKPIAPEATPAEPLVLPATPPAPQPAATPLSGAPAELVPVVVAAEPEKKSWMTRLKAGLSKTSNTLSVLFVGAK
IDDALYEELEAALLMSDAGIDATEFLLTELKKKVKEDKLLDAAAVKAALKVLLIELLSPLEKRFELGRHKPLVMMISGVN
GAGKTTTIGKLAKHMQSNNQSVLLAAGDTFRAAAREQLMVWGERNNVTVISQESGDPAAVAYDSVQSAKARGIDVVMVDT
AGRLPTQLHLMEELKKIKRVIGKGMEGAPHETLLVIDGNTGQNALTQVKAFDDALQLSGLVITKLDGTAKGGVLAAIARV
RPVPVYFIGIGEKIEDLQPFVAAEFVEALLG

Nucleotide

• Length: 1056 bp

>NTDB_id=485978 JAB4_RS05900 WP_070222514.1 1291527..1292582(-) (pilA) [Janthinobacterium sp. HH102]
ATGTTTAGTTTCTTCAAGAAAAAACCCATCGCTCCCGAGGCCACACCAGCCGAGCCCCTCGTCCTTCCCGCCACGCCGCC
CGCACCGCAGCCAGCCGCTACGCCCCTGAGCGGCGCGCCGGCCGAGCTCGTGCCCGTGGTCGTGGCCGCCGAACCCGAGA
AAAAATCGTGGATGACGCGCCTGAAGGCGGGCCTGTCGAAAACCTCGAACACCTTGTCCGTGCTGTTCGTCGGCGCGAAG
ATCGACGACGCCCTGTACGAAGAGCTGGAAGCGGCGCTGCTGATGTCCGACGCCGGCATCGACGCCACCGAATTCCTGCT
CACGGAATTGAAGAAAAAGGTCAAGGAAGACAAGCTGCTCGACGCAGCCGCCGTCAAGGCCGCGCTGAAAGTGCTGCTGA
TCGAGCTCCTGAGCCCGCTGGAAAAGCGCTTCGAGCTGGGCCGCCACAAGCCGCTGGTGATGATGATTTCCGGCGTCAAT
GGCGCCGGCAAGACCACCACCATCGGCAAGCTGGCCAAGCACATGCAGTCGAACAACCAGTCCGTGCTGCTGGCCGCGGG
CGACACCTTCCGCGCCGCCGCGCGCGAGCAGTTGATGGTCTGGGGCGAGCGCAACAACGTTACCGTGATTTCGCAAGAAT
CGGGCGACCCGGCCGCCGTGGCCTACGACTCCGTGCAATCGGCGAAGGCGCGCGGCATCGACGTGGTCATGGTCGACACG
GCCGGCCGCCTGCCGACCCAGTTGCACTTGATGGAAGAATTGAAGAAAATCAAGCGCGTGATCGGCAAGGGCATGGAGGG
CGCGCCGCATGAAACCCTGCTCGTCATCGACGGCAACACGGGTCAGAACGCCCTCACGCAAGTGAAGGCCTTCGACGATG
CCCTGCAGTTGAGCGGCCTGGTGATCACCAAGCTGGACGGTACCGCCAAGGGCGGGGTTCTGGCGGCGATTGCCCGCGTG
CGCCCCGTGCCCGTGTATTTCATCGGCATCGGTGAGAAAATTGAAGACTTGCAGCCCTTCGTGGCTGCCGAATTTGTCGA
AGCGCTGCTCGGATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (152-351)

• SRP54-type protein, helical bundle domain (SRP54_N) (70-130)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	56.707	93.447	0.53