Detailed information NTG0485563

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: IEN91_RS01955
• Genome accession: NZ_CP061938
• Coordinates: 417181..418329 (+)
• Length: 382 a.a.
• NCBI ID: WP_003156336.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain FIO1408
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 412181..423329

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IEN91_RS01935 (IEN91_01935)	-	412578..413261 (-)	684	WP_003156346.1	ABC transporter ATP-binding protein	-
IEN91_RS01940 (IEN91_01940)	-	413276..414712 (-)	1437	WP_196616226.1	ABC transporter permease	-
IEN91_RS01945 (IEN91_01945)	-	414925..415608 (+)	684	WP_024084885.1	response regulator transcription factor	-
IEN91_RS01950 (IEN91_01950)	-	415595..417028 (+)	1434	WP_196616227.1	sensor histidine kinase	-
IEN91_RS01955 (IEN91_01955)	rapC	417181..418329 (+)	1149	WP_003156336.1	Rap family tetratricopeptide repeat protein	Regulator
IEN91_RS01960 (IEN91_01960)	phrC	418313..418432 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
IEN91_RS01965 (IEN91_01965)	-	418582..418692 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
IEN91_RS01970 (IEN91_01970)	-	418772..420136 (-)	1365	WP_003156333.1	aspartate kinase	-
IEN91_RS01975 (IEN91_01975)	ceuB	420551..421504 (+)	954	WP_003156332.1	ABC transporter permease	Machinery gene
IEN91_RS01980 (IEN91_01980)	-	421494..422441 (+)	948	WP_003156331.1	iron chelate uptake ABC transporter family permease subunit	-
IEN91_RS01985 (IEN91_01985)	-	422435..423193 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45521.82 Da
• Isoelectric Point: 5.0732

>NTDB_id=485563 IEN91_RS01955 WP_003156336.1 417181..418329(+) (rapC) [Bacillus velezensis strain FIO1408]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=485563 IEN91_RS01955 WP_003156336.1 417181..418329(+) (rapC) [Bacillus velezensis strain FIO1408]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCAAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCAGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTTTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
CCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568