Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   IE382_RS07810 Genome accession   NZ_CP061870
Coordinates   1505768..1506919 (+) Length   383 a.a.
NCBI ID   WP_041056516.1    Uniprot ID   A0AAQ3EUI1
Organism   Bacillus subtilis strain FX-1     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context

Location: 1500768..1511919
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IE382_RS07775 (IE382_07740) yjbB 1501227..1502444 (+) 1218 WP_080316915.1 MFS transporter -
  IE382_RS07780 (IE382_07745) yjbC 1502609..1503187 (+) 579 WP_144459369.1 GNAT family N-acetyltransferase -
  IE382_RS07785 (IE382_07750) spx 1503368..1503763 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  IE382_RS07790 (IE382_07755) yjbE 1504018..1504674 (-) 657 WP_242304558.1 TerC family protein -
  IE382_RS07795 (IE382_07760) - 1504844..1504984 (+) 141 WP_119122854.1 hypothetical protein -
  IE382_RS07800 (IE382_07765) mecA 1504951..1505607 (+) 657 WP_003232942.1 adaptor protein MecA Regulator
  IE382_RS07805 (IE382_07770) - 1505602..1505724 (-) 123 WP_003245684.1 hypothetical protein -
  IE382_RS07810 (IE382_07775) coiA 1505768..1506919 (+) 1152 WP_041056516.1 competence protein CoiA Machinery gene
  IE382_RS07815 (IE382_07780) pepF 1507149..1508978 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  IE382_RS07820 (IE382_07785) - 1509016..1509183 (-) 168 WP_041056519.1 hypothetical protein -
  IE382_RS07825 (IE382_07790) spxH 1509497..1510396 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  IE382_RS07830 (IE382_07795) yjbI 1510393..1510791 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  IE382_RS07835 (IE382_07800) cwlQ 1511046..1511780 (-) 735 WP_250629275.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence

Protein


Download         Length: 383 a.a.        Molecular weight: 44872.02 Da        Isoelectric Point: 9.9417

>NTDB_id=485428 IE382_RS07810 WP_041056516.1 1505768..1506919(+) (coiA) [Bacillus subtilis strain FX-1]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGADDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKEINRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=485428 IE382_RS07810 WP_041056516.1 1505768..1506919(+) (coiA) [Bacillus subtilis strain FX-1]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGAGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATTCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGACGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAATAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTTGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTTA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(1-373)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.66

97.389

0.961