Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   IE382_RS05950 Genome accession   NZ_CP061870
Coordinates   1165082..1165876 (+) Length   264 a.a.
NCBI ID   WP_041332784.1    Uniprot ID   -
Organism   Bacillus subtilis strain FX-1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1160082..1170876
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IE382_RS05920 (IE382_05880) sxzA 1160922..1161953 (+) 1032 WP_017696454.1 iron ABC transporter permease -
  IE382_RS05925 (IE382_05885) yfhB 1162068..1162949 (+) 882 WP_242304533.1 PhzF family phenazine biosynthesis isomerase -
  IE382_RS05930 (IE382_05890) yfhC 1163037..1163621 (+) 585 WP_003243940.1 nitroreductase -
  IE382_RS05935 (IE382_05895) yfhD 1163660..1163851 (-) 192 WP_003233561.1 YfhD family protein -
  IE382_RS05940 (IE382_05900) - 1163918..1164049 (-) 132 WP_041351182.1 YfhE family protein -
  IE382_RS05945 (IE382_05905) yfhF 1164082..1164993 (-) 912 WP_041332787.1 TIGR01777 family oxidoreductase -
  IE382_RS05950 (IE382_05910) recX 1165082..1165876 (+) 795 WP_041332784.1 recombination regulator RecX Regulator
  IE382_RS05955 (IE382_05915) yfhH 1165878..1166192 (+) 315 WP_003244592.1 YfhH family protein -
  IE382_RS05960 (IE382_05920) yfhI 1166335..1167528 (+) 1194 WP_072557044.1 MFS transporter -
  IE382_RS05965 (IE382_05925) sspK 1167560..1167712 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  IE382_RS05970 (IE382_05930) yfhJ 1167837..1168106 (+) 270 WP_003243789.1 YfhJ family protein -
  IE382_RS05975 (IE382_05935) - 1168217..1169367 (+) 1151 WP_242304535.1 IS3 family transposase -
  IE382_RS05980 (IE382_05940) yfhK 1169541..1170059 (+) 519 WP_003243363.1 SH3 domain-containing protein -
  IE382_RS05985 (IE382_05945) spdL 1170144..1170476 (+) 333 WP_024573182.1 SdpC immunity protein SpdL -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31057.24 Da        Isoelectric Point: 6.6686

>NTDB_id=485416 IE382_RS05950 WP_041332784.1 1165082..1165876(+) (recX) [Bacillus subtilis strain FX-1]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFASAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELRQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=485416 IE382_RS05950 WP_041332784.1 1165082..1165876(+) (recX) [Bacillus subtilis strain FX-1]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCTCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAGGATCAGACAAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAACTTTCGACGAAAGAACTCAGACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992