Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   IE339_RS03770 Genome accession   NZ_CP061868
Coordinates   760832..761794 (+) Length   320 a.a.
NCBI ID   WP_242173664.1    Uniprot ID   -
Organism   Priestia koreensis strain FS-1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 755832..766794
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IE339_RS03750 (IE339_03755) clpB 755902..758502 (+) 2601 WP_242173658.1 ATP-dependent chaperone ClpB -
  IE339_RS03755 (IE339_03760) - 758540..758734 (-) 195 WP_053400081.1 YjzD family protein -
  IE339_RS03760 (IE339_03765) - 759015..759752 (+) 738 WP_242173660.1 alpha/beta hydrolase -
  IE339_RS03765 (IE339_03770) - 759826..760719 (+) 894 WP_242173662.1 NAD(P)-dependent oxidoreductase -
  IE339_RS03770 (IE339_03775) med 760832..761794 (+) 963 WP_242173664.1 BMP family ABC transporter substrate-binding protein Regulator
  IE339_RS03775 (IE339_03780) comZ 761805..761999 (+) 195 WP_242173667.1 ComZ family protein Regulator
  IE339_RS03780 (IE339_03785) - 762227..763159 (+) 933 WP_242173669.1 beta-ketoacyl-ACP synthase III -
  IE339_RS03785 (IE339_03790) fabF 763200..764438 (+) 1239 WP_242173671.1 beta-ketoacyl-ACP synthase II -
  IE339_RS03790 (IE339_03795) - 764562..765350 (+) 789 WP_242173673.1 DUF2268 domain-containing protein -
  IE339_RS03795 (IE339_03800) - 765520..766524 (+) 1005 WP_242176103.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 320 a.a.        Molecular weight: 35815.93 Da        Isoelectric Point: 9.1287

>NTDB_id=485361 IE339_RS03770 WP_242173664.1 760832..761794(+) (med) [Priestia koreensis strain FS-1]
MKRPLSIGCIIVLVLFLASCGQPKDGQLKSVGLLVPETINDQVWGTNGYKGMLKIQSTYNRDVFYKEHTDSERAVKQAVK
EFSKQGVNLIFGHGEEYASYFNKLGKQYPDIHFVSFNGDAKGDNVTTVNFKGKAMGFFGGMVAGKMTKSKKVGVIAAYDW
QPEVKGFLDGVKFQQPNAQVEMKVVKSWDDKKTARQYADEMIKSGVDVVYPAGDGFNVSIIEKLREKGIYAIGYVADQSD
LGQDTVLTSTVQHVDTLYELVAKDYDKGTLKTGNLMYDFDNKVISLGKFSPLVDKAYQKEIQHYINEYKRTGKLPDQQQK

Nucleotide


Download         Length: 963 bp        

>NTDB_id=485361 IE339_RS03770 WP_242173664.1 760832..761794(+) (med) [Priestia koreensis strain FS-1]
ATGAAAAGACCACTAAGTATAGGATGTATAATCGTGCTTGTCCTCTTTTTAGCTAGCTGTGGACAACCTAAGGATGGGCA
GCTAAAAAGTGTTGGCTTATTAGTTCCAGAGACGATCAATGATCAAGTGTGGGGAACAAATGGCTATAAAGGAATGTTAA
AAATACAGTCCACGTATAATCGCGACGTTTTTTATAAAGAACATACAGATTCTGAGAGAGCCGTAAAGCAGGCGGTGAAG
GAATTTTCCAAGCAAGGTGTCAACCTGATTTTTGGTCATGGAGAAGAGTATGCCTCTTATTTTAATAAGCTCGGCAAACA
ATATCCGGACATTCATTTTGTGTCATTTAATGGTGATGCCAAAGGTGACAACGTAACAACGGTGAACTTCAAAGGAAAGG
CCATGGGCTTCTTTGGAGGGATGGTTGCAGGGAAAATGACGAAGTCAAAGAAGGTAGGAGTCATTGCTGCTTACGATTGG
CAGCCTGAGGTGAAAGGCTTTTTAGATGGCGTAAAGTTTCAACAGCCAAACGCTCAGGTTGAGATGAAGGTCGTCAAAAG
CTGGGATGACAAAAAAACGGCTCGACAGTATGCAGACGAAATGATTAAATCAGGAGTAGATGTTGTCTATCCCGCTGGAG
ATGGATTTAATGTTTCTATCATTGAAAAGCTAAGAGAAAAGGGCATATACGCCATTGGCTATGTAGCAGATCAATCCGAC
TTAGGACAGGATACGGTTCTTACGAGCACGGTTCAGCATGTCGATACGCTGTATGAACTCGTAGCGAAAGACTATGATAA
GGGGACGTTAAAGACCGGAAATTTAATGTATGATTTTGATAATAAGGTCATTTCCCTAGGTAAATTTAGCCCGCTCGTTG
ACAAAGCCTATCAAAAGGAAATTCAGCATTATATAAACGAGTATAAAAGAACAGGAAAATTACCTGATCAACAACAGAAA
TAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(29-318)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

52.412

97.188

0.509