Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   BAMOH1_RS05610 Genome accession   NZ_CP061853
Coordinates   1109859..1110812 (+) Length   317 a.a.
NCBI ID   WP_072177123.1    Uniprot ID   A0AAP5QP93
Organism   Bacillus amyloliquefaciens strain MOH1-5b     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1104859..1115812
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAMOH1_RS05585 (BAMOH1_05585) argF 1106676..1107647 (+) 972 WP_021494974.1 ornithine carbamoyltransferase -
  BAMOH1_RS05590 (BAMOH1_05590) - 1107723..1107902 (+) 180 WP_003155070.1 YjzC family protein -
  BAMOH1_RS05595 (BAMOH1_05595) - 1107939..1108124 (-) 186 WP_007409129.1 YjzD family protein -
  BAMOH1_RS05600 (BAMOH1_05600) - 1108385..1109119 (+) 735 WP_014417405.1 hypothetical protein -
  BAMOH1_RS05605 (BAMOH1_05605) - 1109202..1109768 (+) 567 WP_110124641.1 hypothetical protein -
  BAMOH1_RS05610 (BAMOH1_05610) med 1109859..1110812 (+) 954 WP_072177123.1 BMP family ABC transporter substrate-binding protein Regulator
  BAMOH1_RS05615 (BAMOH1_05615) comZ 1110825..1111016 (+) 192 WP_003155061.1 ComZ family protein Regulator
  BAMOH1_RS05620 (BAMOH1_05620) - 1111045..1111263 (-) 219 WP_007409123.1 hypothetical protein -
  BAMOH1_RS05625 (BAMOH1_05625) - 1111430..1112368 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  BAMOH1_RS05630 (BAMOH1_05630) fabF 1112391..1113629 (+) 1239 WP_021494977.1 beta-ketoacyl-ACP synthase II -
  BAMOH1_RS05635 (BAMOH1_05635) - 1113712..1114497 (+) 786 WP_095060850.1 DUF2268 domain-containing protein -
  BAMOH1_RS05640 (BAMOH1_05640) - 1114671..1115657 (+) 987 WP_021494979.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35330.94 Da        Isoelectric Point: 4.6686

>NTDB_id=485268 BAMOH1_RS05610 WP_072177123.1 1109859..1110812(+) (med) [Bacillus amyloliquefaciens strain MOH1-5b]
MITRLVMTFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=485268 BAMOH1_RS05610 WP_072177123.1 1109859..1110812(+) (med) [Bacillus amyloliquefaciens strain MOH1-5b]
TTGATCACCAGGCTTGTCATGACCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCACCTTATGGGAGAAGCAA
TGGGCTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAACCAATGAGGTAGGTGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCCGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.233

100

0.782