Detailed information NTG0485116

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: IEZ30_RS01935
• Genome accession: NZ_CP061849
• Coordinates: 438376..439521 (-)
• Length: 381 a.a.
• NCBI ID: WP_118266446.1
• Uniprot ID: -
• Organism: Chromobacterium haemolyticum strain Bb2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 433376..444521

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IEZ30_RS01915 (IEZ30_01915)	-	433851..435635 (+)	1785	WP_191186270.1	O-antigen ligase family protein	-
IEZ30_RS01920 (IEZ30_01920)	rpoH	435708..436571 (-)	864	WP_019102027.1	RNA polymerase sigma factor RpoH	-
IEZ30_RS01925 (IEZ30_01925)	ftsX	436757..437665 (-)	909	WP_019102028.1	permease-like cell division protein FtsX	-
IEZ30_RS01930 (IEZ30_01930)	ftsE	437662..438315 (-)	654	WP_043592279.1	cell division ATP-binding protein FtsE	-
IEZ30_RS01935 (IEZ30_01935)	pilA	438376..439521 (-)	1146	WP_118266446.1	signal recognition particle-docking protein FtsY	Machinery gene
IEZ30_RS01940 (IEZ30_01940)	rsmD	439759..440316 (+)	558	WP_081574309.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
IEZ30_RS01945 (IEZ30_01945)	-	440420..440671 (+)	252	WP_019100314.1	YfhL family 4Fe-4S dicluster ferredoxin	-
IEZ30_RS01965 (IEZ30_01965)	tuf	441158..442348 (+)	1191	WP_081574305.1	elongation factor Tu	-
IEZ30_RS01975 (IEZ30_01975)	secE	442505..442861 (+)	357	WP_019100014.1	preprotein translocase subunit SecE	-
IEZ30_RS01980 (IEZ30_01980)	nusG	442861..443394 (+)	534	WP_043594671.1	transcription termination/antitermination protein NusG	-
IEZ30_RS01985 (IEZ30_01985)	rplK	443494..443925 (+)	432	WP_019100246.1	50S ribosomal protein L11	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 40686.73 Da
• Isoelectric Point: 6.5182

>NTDB_id=485116 IEZ30_RS01935 WP_118266446.1 438376..439521(-) (pilA) [Chromobacterium haemolyticum strain Bb2]
MFSFFKRKPQSEPTPPTTVQTEPAADAQTIIPPEVAAPAIQQPETRAPEQRHSTAAPAEAAPASTRADTPPEPPQVSLKK
MSWAERLKAGLSKTRDKLGKSLAGLFGGGKIDEELYEELETVLLTADMGVDATQHLLDDVRERVSLKGLKDASELKDALK
GSLSDLISPLEKPLDVSGKKPFVIMMAGVNGAGKTTSIGKLAKYYQSQGKSVLLAAGDTFRAAAREQLMAWGERNNVTVI
AQQGGDSAAVCYDAIQAAVARGIDIVLADTAGRLPTQLHLMEEIKKVKRVIQKALPDAPHEIILVLDANIGQNAITQVKT
FDDALGLTGLILSKLDGTAKGGVIAAIAKQRPVPLRFVGVGESIDDLRPFKAKDYIDALFD

Nucleotide

• Length: 1146 bp

>NTDB_id=485116 IEZ30_RS01935 WP_118266446.1 438376..439521(-) (pilA) [Chromobacterium haemolyticum strain Bb2]
ATGTTTAGCTTCTTCAAAAGAAAACCCCAGTCCGAGCCCACGCCCCCGACAACAGTCCAAACGGAGCCTGCGGCCGACGC
TCAAACCATCATTCCGCCCGAAGTGGCCGCCCCTGCCATCCAACAACCGGAAACACGCGCGCCCGAGCAGCGTCACTCCA
CGGCAGCACCCGCCGAAGCCGCCCCAGCCTCGACGCGCGCCGACACGCCGCCCGAGCCCCCTCAGGTTTCTCTGAAAAAA
ATGAGCTGGGCGGAACGCCTGAAAGCCGGCCTGTCAAAAACCCGCGACAAGCTGGGGAAATCCCTGGCTGGTCTGTTTGG
CGGCGGCAAGATCGACGAAGAGTTGTACGAGGAACTGGAAACCGTTCTGCTCACAGCCGACATGGGGGTGGACGCCACAC
AGCACCTGCTCGACGACGTGCGCGAGCGTGTTTCGCTGAAAGGGCTGAAGGATGCTTCTGAACTGAAAGACGCATTGAAA
GGGTCGCTCAGCGATTTGATCTCGCCACTGGAAAAACCGCTGGACGTTAGCGGCAAGAAACCCTTCGTCATCATGATGGC
CGGCGTCAACGGCGCCGGCAAGACTACTTCGATAGGCAAGCTGGCCAAGTACTATCAAAGCCAGGGCAAGAGCGTGCTGC
TGGCTGCCGGCGACACCTTCCGCGCCGCCGCGCGCGAACAGCTGATGGCCTGGGGCGAGCGCAACAACGTCACCGTGATC
GCCCAGCAAGGGGGCGACTCCGCAGCCGTTTGCTACGACGCGATTCAAGCCGCGGTCGCCCGCGGCATCGACATCGTGCT
GGCAGATACCGCGGGCCGCCTGCCCACCCAACTGCACCTCATGGAAGAGATCAAGAAGGTGAAGCGGGTAATCCAAAAGG
CTTTGCCGGACGCGCCGCATGAAATCATCCTGGTTCTGGACGCCAATATCGGCCAGAACGCCATCACTCAGGTCAAGACT
TTTGACGACGCCCTCGGCCTGACCGGGCTAATCTTGAGCAAGCTGGACGGCACCGCCAAGGGCGGCGTAATCGCGGCCAT
CGCCAAGCAACGCCCCGTTCCGCTGCGCTTTGTCGGCGTGGGCGAAAGCATAGACGACCTGCGGCCGTTCAAAGCCAAGG
ACTACATCGACGCGCTGTTCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (181-380)

• SRP54-type protein, helical bundle domain (SRP54_N) (96-163)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	61.631	100	0.675