Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   IE322_RS23630 Genome accession   NZ_CP061848
Coordinates   5179462..5179863 (+) Length   133 a.a.
NCBI ID   WP_003257770.1    Uniprot ID   A0AAI8FHY9
Organism   Pseudomonas asiatica strain C3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5174462..5184863
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IE322_RS23600 (IE322_23600) - 5174529..5175533 (-) 1005 WP_003257774.1 aspartate carbamoyltransferase catalytic subunit -
  IE322_RS23605 (IE322_23605) pyrR 5175546..5176064 (-) 519 WP_015272082.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  IE322_RS23610 (IE322_23610) ruvX 5176114..5176551 (-) 438 WP_013974530.1 Holliday junction resolvase RuvX -
  IE322_RS23615 (IE322_23615) - 5176551..5177120 (-) 570 WP_015272081.1 YqgE/AlgH family protein -
  IE322_RS23620 (IE322_23620) - 5177299..5178204 (-) 906 WP_100412998.1 energy transducer TonB -
  IE322_RS23625 (IE322_23625) gshB 5178296..5179249 (-) 954 WP_015272080.1 glutathione synthase -
  IE322_RS23630 (IE322_23630) pilG 5179462..5179863 (+) 402 WP_003257770.1 PleD family two-component system response regulator Regulator
  IE322_RS23635 (IE322_23635) pilH 5179911..5180276 (+) 366 WP_003257768.1 twitching motility response regulator PilH -
  IE322_RS23640 (IE322_23640) - 5180273..5180827 (+) 555 WP_003257767.1 chemotaxis protein CheW -
  IE322_RS23645 (IE322_23645) - 5180839..5182893 (+) 2055 WP_015272079.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14576.82 Da        Isoelectric Point: 6.4772

>NTDB_id=485112 IE322_RS23630 WP_003257770.1 5179462..5179863(+) (pilG) [Pseudomonas asiatica strain C3]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHQPSIIFVDVLMPRLDGYQTCAVIKHNSAFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFAAAQQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=485112 IE322_RS23630 WP_003257770.1 5179462..5179863(+) (pilG) [Pseudomonas asiatica strain C3]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGACTCGCGCACGATCCGCCGCACCGCACAGATGTTGCTCGGTGAAGC
GGGCTGCGAGGTGATCACCGCCAGCGATGGCTTCGATGCCCTGGCCAAGATCGTCGACCACCAGCCCAGCATCATCTTCG
TCGATGTGTTGATGCCGCGCCTGGACGGCTACCAGACCTGCGCGGTGATCAAGCACAACAGTGCCTTCAAGGACACCCCG
GTCATTCTGCTGTCGTCACGTGACGGCCTGTTCGACAAGGCCCGCGGCCGGGTGGTCGGCTCCGACCAGTTCCTGACCAA
ACCGTTCAGCAAGGAAGAACTGCTCGACGCGATCCGCGCCCACGTGCCCGGTTTTGCCGCAGCCCAACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70

90.226

0.632