Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   H2514_RS02325 Genome accession   NZ_CP061847
Coordinates   560242..560643 (+) Length   133 a.a.
NCBI ID   WP_036192136.1    Uniprot ID   A0A0A0EQ14
Organism   Lysobacter sp. CW239     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 555242..565643
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H2514_RS02310 (H2514_02310) tsaB 557369..558118 (+) 750 WP_036192134.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  H2514_RS02315 (H2514_02315) - 558205..559077 (-) 873 WP_036192458.1 energy transducer TonB -
  H2514_RS02320 (H2514_02320) gshB 559074..560045 (-) 972 WP_036192135.1 glutathione synthase -
  H2514_RS02325 (H2514_02325) pilG 560242..560643 (+) 402 WP_036192136.1 twitching motility response regulator PilG Regulator
  H2514_RS02330 (H2514_02330) - 560664..561029 (+) 366 WP_036192137.1 response regulator -
  H2514_RS02335 (H2514_02335) - 561026..561580 (+) 555 Protein_462 chemotaxis protein CheW -
  H2514_RS02340 (H2514_02340) - 561648..563669 (+) 2022 WP_036192139.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14887.14 Da        Isoelectric Point: 6.9546

>NTDB_id=485079 H2514_RS02325 WP_036192136.1 560242..560643(+) (pilG) [Lysobacter sp. CW239]
MQDEVRNGSLDGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIKN
NQVFKNTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTRGELLDAIRTHVNNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=485079 H2514_RS02325 WP_036192136.1 560242..560643(+) (pilG) [Lysobacter sp. CW239]
ATGCAAGACGAGGTCCGCAACGGCAGCCTCGATGGTTTGCGAGTCATGGTGATCGACGACTCAAAGACCATCCGCCGCAC
CGCTGAAACGTTGCTCAAGCGCGAAGGTTGCGAGGTGGTCACCGCCACCGACGGCTTCGAAGCGTTGGCAAAGATTGCCG
ACCAACAACCGCAGATCATTTTCGTGGACATCATGATGCCGCGACTGGATGGCTATCAGACCTGCGCGTTGATCAAGAAC
AACCAGGTTTTCAAGAACACGCCGGTCATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCGTGGCCGTATCGT
GGGTTCCGAGCAGTACCTCACCAAACCATTCACGCGCGGGGAACTCCTCGACGCCATACGAACGCACGTCAACAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A0EQ14

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

72.727

99.248

0.722