Detailed information NTG0485024

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: IF132_RS05590
• Genome accession: NZ_CP061844
• Coordinates: 1277563..1278660 (-)
• Length: 365 a.a.
• NCBI ID: WP_039427130.1
• Uniprot ID: A0A099LVY0
• Organism: Vibrio navarrensis strain 2540-90
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1272563..1283660

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IF132_RS05570 (IF132_05535)	-	1272621..1273076 (-)	456	WP_039427136.1	Lrp/AsnC family transcriptional regulator	-
IF132_RS05575 (IF132_05540)	-	1273217..1274155 (+)	939	WP_039427134.1	DMT family transporter	-
IF132_RS05580 (IF132_05545)	-	1274295..1274957 (+)	663	WP_039427133.1	flagellar brake protein	-
IF132_RS05585 (IF132_05550)	luxQ	1274992..1277559 (-)	2568	WP_039427132.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
IF132_RS05590 (IF132_05555)	luxP	1277563..1278660 (-)	1098	WP_039427130.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
IF132_RS05595 (IF132_05560)	-	1278883..1280043 (-)	1161	WP_039427128.1	conjugal transfer protein TraF	-
IF132_RS05600 (IF132_05565)	-	1280116..1280412 (-)	297	WP_039427126.1	GIY-YIG nuclease family protein	-
IF132_RS05605 (IF132_05570)	-	1280412..1281071 (-)	660	WP_039427124.1	YceH family protein	-
IF132_RS05610 (IF132_05575)	-	1281171..1281374 (-)	204	WP_039427123.1	hypothetical protein	-
IF132_RS05615 (IF132_05580)	-	1281647..1281964 (+)	318	WP_039427122.1	DUF496 family protein	-
IF132_RS05620 (IF132_05585)	-	1282133..1283473 (+)	1341	WP_039427120.1	MATE family efflux transporter	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41439.99 Da
• Isoelectric Point: 5.7255

>NTDB_id=485024 IF132_RS05590 WP_039427130.1 1277563..1278660(-) (luxP) [Vibrio navarrensis strain 2540-90]
MKKALMMSLLCLANFSANAQTSEVLNGYWAYQEYLERFPEQADLTNALAQTVRNHPVPLKAYQAKPVRISVVFPGQQVSD
YWVRNLSAFEKRMDKLQISYQINQVFTRPNADIKQQSVSLMEALKSKSDYLIFTLDTTRHRKFIEHVLDSSDTKLILQNI
TTPVQAWEKRQPFLYVGFDHAQGSIALAKQLEKMYPQGGQYSVLYFSEGYVSDARGDTFIRELNRDNHFQLRSSFYTKAT
KESGYETAMMSLEKYPDVNFIYACSTDVALGALDALKELKRDDIVLNGWGGGSAELDAISAGDLDLTVMRMNDDTGIAMA
EAIKWDLEGKKVPTVFSGDFEVVTKEDSPQHIETLKERAFRYSGQ

Nucleotide

• Length: 1098 bp

>NTDB_id=485024 IF132_RS05590 WP_039427130.1 1277563..1278660(-) (luxP) [Vibrio navarrensis strain 2540-90]
ATGAAAAAAGCATTAATGATGTCTTTGCTTTGTTTAGCAAATTTTAGTGCCAATGCACAAACTTCAGAAGTCTTGAACGG
ATATTGGGCGTATCAAGAATATTTAGAGCGCTTTCCAGAACAAGCCGATTTAACCAATGCGCTTGCGCAAACAGTACGTA
ACCATCCTGTGCCGCTCAAAGCGTATCAGGCAAAGCCTGTGCGTATTTCGGTGGTGTTTCCCGGCCAACAAGTTTCTGAT
TACTGGGTTAGGAATCTGAGTGCGTTTGAGAAACGCATGGATAAGCTGCAGATAAGCTATCAGATCAATCAAGTGTTCAC
CCGTCCAAATGCCGATATTAAGCAGCAAAGCGTATCACTGATGGAAGCGCTAAAAAGTAAGTCGGATTATCTGATTTTTA
CCCTAGACACCACCCGTCACCGCAAATTCATTGAGCATGTTCTTGACTCCTCGGACACTAAGCTGATCTTGCAAAACATC
ACCACACCAGTACAGGCATGGGAAAAACGTCAACCATTTTTATATGTCGGCTTCGATCATGCGCAAGGCAGTATTGCGCT
GGCTAAGCAGTTGGAAAAAATGTATCCGCAAGGTGGTCAGTACTCCGTGCTCTATTTCTCTGAAGGTTATGTTAGTGATG
CCAGAGGCGATACATTTATTCGTGAGCTAAACAGAGACAACCATTTTCAATTGCGCTCGTCGTTCTACACCAAAGCGACC
AAAGAATCTGGCTATGAAACTGCTATGATGAGCTTAGAAAAGTATCCAGATGTCAACTTCATCTATGCCTGCTCGACCGA
TGTCGCCTTAGGCGCGCTTGATGCGTTAAAAGAGCTCAAACGAGACGACATTGTGCTCAACGGCTGGGGCGGTGGATCGG
CTGAGTTGGACGCTATCAGCGCTGGCGATCTCGACCTCACTGTCATGCGAATGAATGATGATACGGGTATTGCGATGGCA
GAAGCGATTAAGTGGGATTTGGAAGGGAAGAAAGTCCCGACCGTATTTTCAGGAGATTTTGAAGTGGTGACCAAAGAAGA
TAGCCCGCAACACATTGAAACGCTTAAAGAGAGAGCCTTCAGATATTCTGGCCAATAG

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (70-330)

3D structure

• AlphaFold DB: A0A099LVY0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	64.738	99.452	0.644