Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   I872_RS02660 Genome accession   NC_021175
Coordinates   546047..546511 (+) Length   154 a.a.
NCBI ID   WP_002904550.1    Uniprot ID   A0ABM5NIU9
Organism   Streptococcus cristatus AS 1.3089     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 541047..551511
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I872_RS02635 (I872_02600) - 541153..542091 (+) 939 WP_015604611.1 dihydroorotate dehydrogenase -
  I872_RS02640 (I872_02605) pyrF 542296..542988 (+) 693 WP_015604612.1 orotidine-5'-phosphate decarboxylase -
  I872_RS02645 (I872_02610) pyrE 543057..543686 (+) 630 WP_015604613.1 orotate phosphoribosyltransferase -
  I872_RS02650 (I872_02615) - 543799..545325 (+) 1527 WP_015604614.1 glycosyltransferase family 39 protein -
  I872_RS02655 (I872_02620) - 545385..546038 (+) 654 WP_002897503.1 uracil-DNA glycosylase -
  I872_RS02660 (I872_02625) mutX 546047..546511 (+) 465 WP_002904550.1 NUDIX hydrolase Machinery gene
  I872_RS02665 (I872_02630) - 546524..547792 (+) 1269 WP_015604615.1 dihydroorotase -
  I872_RS02670 (I872_02635) nt5e 548084..550333 (+) 2250 WP_015604616.1 cell surface ecto-5'-nucleotidase Nt5e -
  I872_RS02675 (I872_02640) plsY 550513..551157 (-) 645 WP_041826781.1 glycerol-3-phosphate 1-O-acyltransferase PlsY -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17831.21 Da        Isoelectric Point: 4.3092

>NTDB_id=48502 I872_RS02660 WP_002904550.1 546047..546511(+) (mutX) [Streptococcus cristatus AS 1.3089]
MVQLATICYIDNGREFLMLHRNKKPNDVHAGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGELIDCNEGTLEWVPYDQVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=48502 I872_RS02660 WP_002904550.1 546047..546511(+) (mutX) [Streptococcus cristatus AS 1.3089]
ATGGTTCAGTTAGCAACAATTTGTTATATCGATAATGGGCGGGAATTTCTCATGCTGCACCGCAACAAAAAGCCCAATGA
TGTTCATGCTGGGAAATGGATTGGTGTCGGTGGCAAGCTGGAGCGGGGAGAAACCCCGCAGGAGTGTGCTGCACGCGAAA
TTCTAGAGGAAACAGGTCTAAAGGCAAAGCCTGTCCTAAAAGGCGTTATCACTTTTCCTGAGTTTACTCCCGACTTGGAC
TGGTACACCTATGTTTTCAAGGTGACGGAGTTTGAAGGAGAGTTGATTGATTGCAATGAAGGGACGCTGGAATGGGTGCC
TTACGATCAGGTGCTTTCAAAACCGACTTGGGAAGGAGATCATACCTTTGTTGAATGGCTGCTGGAGGATAAGCCCTTCT
TTTCAGCCAAATTTGTTTATGATGGTGATAAACTGCTCGACACGCAGGTTGATTTTTACGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

94.805

100

0.948

Multiple sequence alignment