Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | I872_RS01380 | Genome accession | NC_021175 |
| Coordinates | 278232..280343 (+) | Length | 703 a.a. |
| NCBI ID | WP_015604388.1 | Uniprot ID | A0ABM5NI55 |
| Organism | Streptococcus cristatus AS 1.3089 | ||
| Function | repress competence development (at the early growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 273232..285343
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I872_RS01360 (I872_01340) | - | 273999..274925 (-) | 927 | WP_015604386.1 | aldo/keto reductase | - |
| I872_RS01370 (I872_01345) | rpsO | 275200..275469 (+) | 270 | WP_004193424.1 | 30S ribosomal protein S15 | - |
| I872_RS01375 (I872_01350) | glmS | 275903..277714 (+) | 1812 | WP_015604387.1 | glutamine--fructose-6-phosphate transaminase (isomerizing) | - |
| I872_RS01380 (I872_01355) | clpE | 278232..280343 (+) | 2112 | WP_015604388.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| I872_RS01385 (I872_01360) | - | 280651..281523 (-) | 873 | WP_015604389.1 | AraC family transcriptional regulator | - |
| I872_RS01390 (I872_01365) | - | 281782..282168 (+) | 387 | WP_015604390.1 | VOC family protein | - |
| I872_RS01395 (I872_01370) | - | 282268..282618 (-) | 351 | WP_015604391.1 | hypothetical protein | - |
| I872_RS01400 (I872_01375) | - | 282907..283365 (+) | 459 | WP_015604392.1 | CtsR family transcriptional regulator | - |
Sequence
Protein
Download Length: 703 a.a. Molecular weight: 77733.63 Da Isoelectric Point: 4.9239
>NTDB_id=48490 I872_RS01380 WP_015604388.1 278232..280343(+) (clpE) [Streptococcus cristatus AS 1.3089]
MNNNYNNFNSMDDLFNQLMGRMGGYNSEHRRYLINGREVTPEEFAQYRATGKLPGQMASEQDLQAGAHGPKQDGILAKLG
RNLTQEAREGKLDPVIGRNKEIQETAEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISVDISGL
EAGTQYRGSFEENIQNLVNEVKEAGNVILFFDEIHQILGAGSTGGDSGSKGLADILKPALSRGELTVIGATTQDEYRNTI
LKNAALARRFNEVKVNAPSAEDTYQILRGIRDLYEKHHNVILPDEVLKAAVDYSVQYIPQRSLPDKAIDLVDVTAAHLAA
QHPVTDVHAVEHEIAEQKDKQEAAVEKEDYEAALNAKTRIEELEKKIQNHTEDMKVTATVNDVAESVERMTGVPVSQMGA
SDIERLKGMNDRLKAKVIGQDKAVEAVARAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGTKDAIIRLD
MSEYSDRTAVSKLIGTTAGYVGYDDNNNTLTERVRRNPYSIILLDEIEKADPQVITLLLQVLDDGRLTDGQGNTVNFKNT
VIIATSNAGFGYEAGLEEDAEKPELMDRLKHYFRPEFLNRFNAVIEFSHLKKEDLMEIVNLMLVEVNQTLSKKEIDLAVS
DAAKEFLRDAGYDQVMGVRPLRRVIEQQIRDKVTDFHLDNLDAKHLTADMEDGTLVIRAKSAE
MNNNYNNFNSMDDLFNQLMGRMGGYNSEHRRYLINGREVTPEEFAQYRATGKLPGQMASEQDLQAGAHGPKQDGILAKLG
RNLTQEAREGKLDPVIGRNKEIQETAEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISVDISGL
EAGTQYRGSFEENIQNLVNEVKEAGNVILFFDEIHQILGAGSTGGDSGSKGLADILKPALSRGELTVIGATTQDEYRNTI
LKNAALARRFNEVKVNAPSAEDTYQILRGIRDLYEKHHNVILPDEVLKAAVDYSVQYIPQRSLPDKAIDLVDVTAAHLAA
QHPVTDVHAVEHEIAEQKDKQEAAVEKEDYEAALNAKTRIEELEKKIQNHTEDMKVTATVNDVAESVERMTGVPVSQMGA
SDIERLKGMNDRLKAKVIGQDKAVEAVARAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGTKDAIIRLD
MSEYSDRTAVSKLIGTTAGYVGYDDNNNTLTERVRRNPYSIILLDEIEKADPQVITLLLQVLDDGRLTDGQGNTVNFKNT
VIIATSNAGFGYEAGLEEDAEKPELMDRLKHYFRPEFLNRFNAVIEFSHLKKEDLMEIVNLMLVEVNQTLSKKEIDLAVS
DAAKEFLRDAGYDQVMGVRPLRRVIEQQIRDKVTDFHLDNLDAKHLTADMEDGTLVIRAKSAE
Nucleotide
Download Length: 2112 bp
>NTDB_id=48490 I872_RS01380 WP_015604388.1 278232..280343(+) (clpE) [Streptococcus cristatus AS 1.3089]
ATGAACAACAATTACAACAATTTTAACAGTATGGATGACCTTTTCAACCAACTCATGGGGCGTATGGGTGGCTACAATAG
CGAACACCGGCGTTACTTGATCAATGGTAGAGAGGTCACACCGGAAGAGTTTGCTCAGTACCGAGCTACTGGAAAGCTCC
CTGGTCAAATGGCTAGCGAACAGGATTTGCAAGCTGGAGCGCATGGGCCTAAGCAAGACGGCATTCTGGCTAAGCTAGGT
CGCAATCTGACCCAAGAAGCGCGTGAAGGCAAGCTGGATCCAGTCATTGGACGCAATAAGGAAATCCAAGAAACAGCGGA
AATCCTTTCCCGCCGGACCAAGAATAATCCAGTTCTGGTCGGAGATGCAGGTGTCGGAAAGACCGCTGTCGTAGAAGGAT
TGGCTCAGGCTATCGTCAATGGTGACGTGCCAGCGGCCATCAAGAACAAAGAAATTATTTCTGTTGATATTTCTGGCTTG
GAAGCTGGTACTCAATATCGTGGTAGCTTTGAAGAAAATATCCAAAACTTGGTCAATGAAGTCAAGGAAGCCGGGAATGT
TATCCTCTTCTTTGACGAAATCCATCAAATTCTGGGTGCAGGATCTACTGGCGGAGACAGTGGTTCTAAGGGACTGGCAG
ATATTCTCAAACCAGCGCTTTCGCGTGGTGAACTGACTGTTATCGGGGCTACTACTCAGGACGAGTACCGCAATACTATT
CTCAAAAATGCAGCTTTAGCTCGTCGTTTCAATGAAGTTAAGGTCAATGCACCGTCTGCTGAGGATACTTATCAGATCCT
TCGAGGTATTCGGGACCTGTATGAAAAGCACCACAATGTCATCCTGCCGGATGAAGTGCTGAAAGCGGCTGTGGATTACT
CTGTTCAGTATATTCCACAACGGAGCCTGCCAGACAAGGCCATTGACCTGGTCGACGTGACTGCTGCCCACCTGGCAGCC
CAGCATCCAGTAACCGATGTCCATGCGGTTGAACATGAGATTGCTGAGCAAAAAGACAAACAGGAAGCAGCTGTTGAGAA
AGAAGATTATGAAGCAGCTCTGAATGCCAAGACCCGCATCGAAGAGCTGGAAAAGAAAATTCAAAACCACACCGAGGATA
TGAAGGTAACGGCGACAGTCAACGATGTAGCTGAGTCTGTTGAGCGGATGACGGGAGTGCCGGTATCTCAGATGGGTGCC
AGCGACATTGAGCGCCTCAAGGGCATGAATGACCGCCTCAAAGCCAAAGTTATTGGCCAAGACAAGGCTGTAGAAGCTGT
GGCTAGAGCCATCCGCCGTAACCGTGCAGGCTTTGACGAAGGTAACCGTCCGATCGGCAGCTTCCTCTTCGTTGGTCCGA
CAGGGGTTGGTAAGACTGAGTTGGCTAAGCAACTGGCTCTGGATATGTTCGGTACCAAGGATGCTATCATCCGTCTGGAC
ATGTCTGAGTACTCTGACCGCACCGCTGTTTCCAAGCTGATTGGTACGACTGCTGGTTATGTCGGCTATGATGACAACAA
CAACACTCTGACCGAGCGCGTGCGCCGCAATCCATACTCTATCATTCTCTTGGATGAGATTGAAAAGGCTGATCCACAAG
TGATTACCCTTCTCCTTCAAGTTCTGGATGATGGACGTTTGACGGATGGTCAAGGGAATACAGTCAACTTCAAGAACACG
GTTATCATTGCAACTTCTAATGCTGGCTTTGGCTATGAAGCAGGCTTGGAAGAGGATGCAGAAAAGCCTGAGCTGATGGA
TCGACTCAAACATTATTTCCGCCCAGAGTTCCTCAATCGTTTCAATGCAGTGATCGAGTTCTCTCATCTCAAGAAAGAAG
ATTTGATGGAAATTGTGAATCTCATGCTGGTTGAAGTAAATCAAACTTTGAGCAAGAAGGAAATTGATCTGGCTGTATCT
GATGCAGCTAAGGAGTTCCTGCGTGATGCTGGTTATGACCAAGTCATGGGTGTTCGTCCACTCCGCCGTGTCATCGAGCA
GCAAATTCGTGACAAGGTGACTGACTTCCACTTGGATAACCTAGATGCTAAGCACCTGACTGCAGATATGGAAGATGGAA
CTTTGGTGATCCGTGCAAAATCAGCAGAATAA
ATGAACAACAATTACAACAATTTTAACAGTATGGATGACCTTTTCAACCAACTCATGGGGCGTATGGGTGGCTACAATAG
CGAACACCGGCGTTACTTGATCAATGGTAGAGAGGTCACACCGGAAGAGTTTGCTCAGTACCGAGCTACTGGAAAGCTCC
CTGGTCAAATGGCTAGCGAACAGGATTTGCAAGCTGGAGCGCATGGGCCTAAGCAAGACGGCATTCTGGCTAAGCTAGGT
CGCAATCTGACCCAAGAAGCGCGTGAAGGCAAGCTGGATCCAGTCATTGGACGCAATAAGGAAATCCAAGAAACAGCGGA
AATCCTTTCCCGCCGGACCAAGAATAATCCAGTTCTGGTCGGAGATGCAGGTGTCGGAAAGACCGCTGTCGTAGAAGGAT
TGGCTCAGGCTATCGTCAATGGTGACGTGCCAGCGGCCATCAAGAACAAAGAAATTATTTCTGTTGATATTTCTGGCTTG
GAAGCTGGTACTCAATATCGTGGTAGCTTTGAAGAAAATATCCAAAACTTGGTCAATGAAGTCAAGGAAGCCGGGAATGT
TATCCTCTTCTTTGACGAAATCCATCAAATTCTGGGTGCAGGATCTACTGGCGGAGACAGTGGTTCTAAGGGACTGGCAG
ATATTCTCAAACCAGCGCTTTCGCGTGGTGAACTGACTGTTATCGGGGCTACTACTCAGGACGAGTACCGCAATACTATT
CTCAAAAATGCAGCTTTAGCTCGTCGTTTCAATGAAGTTAAGGTCAATGCACCGTCTGCTGAGGATACTTATCAGATCCT
TCGAGGTATTCGGGACCTGTATGAAAAGCACCACAATGTCATCCTGCCGGATGAAGTGCTGAAAGCGGCTGTGGATTACT
CTGTTCAGTATATTCCACAACGGAGCCTGCCAGACAAGGCCATTGACCTGGTCGACGTGACTGCTGCCCACCTGGCAGCC
CAGCATCCAGTAACCGATGTCCATGCGGTTGAACATGAGATTGCTGAGCAAAAAGACAAACAGGAAGCAGCTGTTGAGAA
AGAAGATTATGAAGCAGCTCTGAATGCCAAGACCCGCATCGAAGAGCTGGAAAAGAAAATTCAAAACCACACCGAGGATA
TGAAGGTAACGGCGACAGTCAACGATGTAGCTGAGTCTGTTGAGCGGATGACGGGAGTGCCGGTATCTCAGATGGGTGCC
AGCGACATTGAGCGCCTCAAGGGCATGAATGACCGCCTCAAAGCCAAAGTTATTGGCCAAGACAAGGCTGTAGAAGCTGT
GGCTAGAGCCATCCGCCGTAACCGTGCAGGCTTTGACGAAGGTAACCGTCCGATCGGCAGCTTCCTCTTCGTTGGTCCGA
CAGGGGTTGGTAAGACTGAGTTGGCTAAGCAACTGGCTCTGGATATGTTCGGTACCAAGGATGCTATCATCCGTCTGGAC
ATGTCTGAGTACTCTGACCGCACCGCTGTTTCCAAGCTGATTGGTACGACTGCTGGTTATGTCGGCTATGATGACAACAA
CAACACTCTGACCGAGCGCGTGCGCCGCAATCCATACTCTATCATTCTCTTGGATGAGATTGAAAAGGCTGATCCACAAG
TGATTACCCTTCTCCTTCAAGTTCTGGATGATGGACGTTTGACGGATGGTCAAGGGAATACAGTCAACTTCAAGAACACG
GTTATCATTGCAACTTCTAATGCTGGCTTTGGCTATGAAGCAGGCTTGGAAGAGGATGCAGAAAAGCCTGAGCTGATGGA
TCGACTCAAACATTATTTCCGCCCAGAGTTCCTCAATCGTTTCAATGCAGTGATCGAGTTCTCTCATCTCAAGAAAGAAG
ATTTGATGGAAATTGTGAATCTCATGCTGGTTGAAGTAAATCAAACTTTGAGCAAGAAGGAAATTGATCTGGCTGTATCT
GATGCAGCTAAGGAGTTCCTGCGTGATGCTGGTTATGACCAAGTCATGGGTGTTCGTCCACTCCGCCGTGTCATCGAGCA
GCAAATTCGTGACAAGGTGACTGACTTCCACTTGGATAACCTAGATGCTAAGCACCTGACTGCAGATATGGAAGATGGAA
CTTTGGTGATCCGTGCAAAATCAGCAGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus mutans UA159 |
47.084 |
100 |
0.471 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.695 |
93.314 |
0.464 |
| clpE | Streptococcus pneumoniae R6 |
48.762 |
91.892 |
0.448 |
| clpE | Streptococcus pneumoniae D39 |
48.762 |
91.892 |
0.448 |
| clpE | Streptococcus pneumoniae Rx1 |
48.762 |
91.892 |
0.448 |
| clpE | Streptococcus pneumoniae TIGR4 |
48.523 |
91.465 |
0.444 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
44.932 |
94.026 |
0.422 |
| clpC | Streptococcus pneumoniae Rx1 |
42.59 |
91.181 |
0.388 |
| clpC | Streptococcus pneumoniae TIGR4 |
42.59 |
91.181 |
0.388 |
| clpC | Streptococcus pneumoniae D39 |
42.59 |
91.181 |
0.388 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
43.182 |
87.624 |
0.378 |
| clpC | Streptococcus mutans UA159 |
42.673 |
88.336 |
0.377 |
| clpC | Streptococcus thermophilus LMG 18311 |
42.649 |
88.051 |
0.376 |
| clpC | Streptococcus thermophilus LMD-9 |
42.139 |
87.767 |
0.37 |