Detailed information NTG0484887

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: IC779_RS08665
• Genome accession: NZ_CP061828
• Coordinates: 1808600..1809415 (+)
• Length: 271 a.a.
• NCBI ID: WP_077168510.1
• Uniprot ID: -
• Organism: Acinetobacter seifertii strain AS42
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1803600..1814415

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IC779_RS08630 (IC779_08630)	kdsB	1804125..1804886 (+)	762	WP_049064951.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
IC779_RS08635 (IC779_08635)	-	1804898..1805878 (+)	981	WP_077168508.1	DNA polymerase III subunit delta'	-
IC779_RS08640 (IC779_08640)	-	1805891..1806232 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
IC779_RS08645 (IC779_08645)	-	1806250..1807023 (+)	774	WP_077168509.1	TatD family hydrolase	-
IC779_RS08650 (IC779_08650)	-	1807061..1807669 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
IC779_RS08655 (IC779_08655)	-	1807679..1808230 (+)	552	WP_004701984.1	type II secretion system protein	-
IC779_RS08660 (IC779_08660)	xcpV	1808220..1808600 (+)	381	WP_019458993.1	type II secretion system minor pseudopilin GspI	Machinery gene
IC779_RS08665 (IC779_08665)	xcpW	1808600..1809415 (+)	816	WP_077168510.1	type II secretion system minor pseudopilin GspJ	Machinery gene
IC779_RS08670 (IC779_08670)	gspK	1809415..1810371 (+)	957	WP_077168511.1	type II secretion system minor pseudopilin GspK	-
IC779_RS08675 (IC779_08675)	-	1810601..1811197 (+)	597	WP_077168512.1	6-pyruvoyl trahydropterin synthase family protein	-
IC779_RS08680 (IC779_08680)	ung	1811248..1811961 (+)	714	WP_077168513.1	uracil-DNA glycosylase	-
IC779_RS08685 (IC779_08685)	-	1811958..1813082 (+)	1125	WP_019458997.1	enoyl-CoA hydratase/isomerase family protein	-
IC779_RS08690 (IC779_08690)	tadA	1813090..1813592 (+)	503	Protein_1701	tRNA adenosine(34) deaminase TadA	-
IC779_RS08695 (IC779_08695)	-	1813662..1814102 (+)	441	WP_107973453.1	SRPBCC family protein	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30658.14 Da
• Isoelectric Point: 9.8524

>NTDB_id=484887 IC779_RS08665 WP_077168510.1 1808600..1809415(+) (xcpW) [Acinetobacter seifertii strain AS42]
MIKNKYFHYRSTAAHLAARSGVVSTGYSEHSSSFCAQTKCSFKDPHTRNMVSRLAARSSSVRLTRASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAVHEVHLFELQDAYQQILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
QGLSPFERIEYRYDAEQKKLYRLKYTNLNTSNREQPLSSTLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKG
IKIQLTVAGVSYEWIYSLNQGNLALSQQGGS

Nucleotide

• Length: 816 bp

>NTDB_id=484887 IC779_RS08665 WP_077168510.1 1808600..1809415(+) (xcpW) [Acinetobacter seifertii strain AS42]
ATGATAAAAAATAAATATTTTCACTATCGTAGCACAGCTGCGCATCTTGCGGCACGATCAGGAGTTGTGTCGACTGGCTA
TTCAGAGCATAGCTCTTCGTTTTGCGCTCAGACAAAGTGTAGCTTTAAAGACCCTCACACTCGAAACATGGTTTCTCGTC
TTGCGGCGCGATCGAGCAGTGTTCGATTAACTCGCGCCTCAGGATTTACGTTGGTTGAGTTGTTGGTTGCTATAGCTATC
TTTGCGGTTTTATCTTTATTAGGGTGGAAAATTTTCGATTATCTACTCAAGGTTCGTGATCGCAACGCTGTACATGAAGT
GCATTTATTTGAGTTACAAGACGCTTATCAACAAATCCTTCGTGATACTTTGCAAATTATTCCTCTATCGGCAAATCAGG
GTGGACAACTTCATCCAGCTTTAGAAATCGATAATCAAATTTTGCGTTTTAGCAAAGCAGGGGTAACTGATCCTTTAAAA
CAAGGGCTCTCACCGTTTGAACGAATTGAGTATCGTTATGATGCGGAACAAAAAAAACTATATCGTCTTAAATATACCAA
TTTAAATACTTCGAATAGGGAGCAGCCTTTATCGAGTACCTTGTTAAGTCAAGTTGATCAATACCAAATTATGGTTTTGA
CTCCGCAAGAGGTAACAAAATGGCCCGAGGTTAATATTGATCCAACAAAGCCTAACGAGTTAAAAAAATTACCGAAAGGA
ATAAAAATCCAACTTACAGTAGCGGGAGTAAGTTATGAATGGATCTATAGCTTAAATCAAGGCAACTTGGCCCTTTCTCA
GCAAGGTGGTTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	94.69	83.395	0.79