Detailed information NTG0484866

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: IC779_RS00890
• Genome accession: NZ_CP061828
• Coordinates: 188468..189622 (-)
• Length: 384 a.a.
• NCBI ID: WP_077166210.1
• Uniprot ID: A0A5E9PD55
• Organism: Acinetobacter seifertii strain AS42
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 183468..194622

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IC779_RS00870 (IC779_00870)	-	184626..185279 (+)	654	WP_077164355.1	TetR/AcrR family transcriptional regulator	-
IC779_RS00875 (IC779_00875)	-	185386..186306 (+)	921	WP_004705929.1	DMT family transporter	-
IC779_RS00880 (IC779_00880)	-	186697..187266 (-)	570	WP_077169692.1	L-threonylcarbamoyladenylate synthase	-
IC779_RS00885 (IC779_00885)	dprA	187317..188447 (-)	1131	WP_077169691.1	DNA-processing protein DprA	Machinery gene
IC779_RS00890 (IC779_00890)	tsaP	188468..189622 (-)	1155	WP_077166210.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
IC779_RS00895 (IC779_00895)	def	189745..190275 (+)	531	WP_004705924.1	peptide deformylase	-
IC779_RS00900 (IC779_00900)	-	190311..190736 (+)	426	WP_004705923.1	DUF2946 family protein	-
IC779_RS00905 (IC779_00905)	-	190810..192924 (+)	2115	WP_151792503.1	TonB-dependent copper receptor	-
IC779_RS00910 (IC779_00910)	-	192978..193184 (+)	207	WP_039252952.1	hypothetical protein	-
IC779_RS00915 (IC779_00915)	-	193253..194467 (-)	1215	WP_077169689.1	oxygenase MpaB family protein	-

Sequence

Protein

• Length: 384 a.a.
• Molecular weight: 42338.24 Da
• Isoelectric Point: 8.2514

>NTDB_id=484866 IC779_RS00890 WP_077166210.1 188468..189622(-) (tsaP) [Acinetobacter seifertii strain AS42]
MKKVFDGMVQFHALGIKKHLLALALCTGVAFGTVAEVHAASPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQTTNLQPQVRVEALNNSVPVIPLEHIKQWLE
HSTILPADSIANTPYIVGTADQRVLAGKGQTIYARGKGLVEGQRYAVYREGEPYYFTDSKGKKHSLGIELSQVASGVAMS
TEKDITTLELTDSYDGEVRRGDRVMPEEQANLPTLFYPVDAKQVTDGGKIIRVMGSIGRAAKNSVVTLDRGTAQGVQVGQ
VFDIDQQGETIRDPKTKEPIQLPGQQIGSLMVFRTFDQLSYAYVLESNLPIKVGSSIQPPRFTD

Nucleotide

• Length: 1155 bp

>NTDB_id=484866 IC779_RS00890 WP_077166210.1 188468..189622(-) (tsaP) [Acinetobacter seifertii strain AS42]
ATGAAAAAGGTTTTTGACGGCATGGTTCAATTTCATGCTTTGGGGATAAAAAAGCATTTACTTGCTTTAGCACTCTGTAC
AGGAGTTGCATTTGGTACGGTAGCAGAGGTTCATGCTGCCAGTCCGAATCATAATCCGCCTTCTCTTAAAAGCAATGCAC
CCAATGTGTATGTTGTAAAACGTGGAGATACCTTATGGGATATTTCAGGTCATTTTCTAAATAAACCATGGCGTTGGCCT
GAAATCTGGGCAAGCAATCAACATGTTAAAAATCCGCACTGGATCTATCCTGGTGACAGATTACTACTGTGCAGCTTAGA
TGGACGACCATTGGTAGGTAAAGATGAAGGAGATGGCTGTGTAGGTATTATTCGTCGTTACACAGGCCAAACCACAAACT
TGCAACCACAAGTTCGTGTCGAAGCATTAAATAACAGTGTACCAGTTATTCCACTTGAACATATTAAACAGTGGTTAGAG
CACAGTACTATTTTACCAGCCGATTCAATTGCCAACACACCTTACATTGTTGGGACAGCAGATCAACGTGTACTTGCAGG
AAAAGGCCAAACTATTTATGCAAGAGGAAAAGGTCTGGTTGAAGGTCAGCGCTACGCTGTTTATCGCGAAGGCGAACCTT
ACTATTTCACAGACAGTAAAGGTAAAAAGCATAGTTTAGGCATAGAGCTGTCACAGGTTGCTTCTGGTGTTGCGATGTCT
ACTGAAAAAGACATTACCACATTAGAACTTACCGATAGCTATGATGGTGAAGTACGTCGTGGCGATCGTGTTATGCCTGA
AGAACAAGCTAATTTACCAACATTATTTTACCCCGTAGATGCTAAACAAGTGACTGACGGTGGCAAAATTATTCGCGTCA
TGGGATCAATTGGTAGGGCTGCAAAAAATAGTGTCGTGACTTTAGACCGCGGTACAGCACAAGGTGTTCAGGTAGGTCAG
GTTTTTGATATTGATCAACAAGGCGAGACCATTCGCGATCCAAAAACAAAAGAACCAATTCAGCTACCTGGTCAACAAAT
TGGTAGTTTAATGGTCTTTAGAACTTTTGATCAGCTGAGCTATGCTTATGTTCTAGAAAGCAACTTACCAATTAAAGTCG
GTTCAAGCATTCAGCCACCTCGTTTTACTGATTAG

Domains

Predicted by InterproScan.

• LysM domain (LysM) (57-102)

3D structure

• AlphaFold DB: A0A5E9PD55

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	92.969	100	0.93