Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   J7U34_RS05645 Genome accession   NZ_CP072778
Coordinates   1082036..1082518 (-) Length   160 a.a.
NCBI ID   WP_011226072.1    Uniprot ID   Q5M461
Organism   Streptococcus thermophilus strain S24748     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1077036..1087518
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7U34_RS05625 (J7U34_05600) pepT 1077517..1078740 (-) 1224 WP_014608366.1 peptidase T -
  J7U34_RS05630 (J7U34_05605) lepB 1078948..1079505 (-) 558 WP_011681191.1 signal peptidase I -
  J7U34_RS05635 (J7U34_05610) - 1079628..1080857 (-) 1230 WP_138496690.1 lipopolysaccharide assembly protein LapB -
  J7U34_RS05640 (J7U34_05615) - 1080847..1082025 (-) 1179 WP_138496689.1 AI-2E family transporter -
  J7U34_RS05645 (J7U34_05620) mutX 1082036..1082518 (-) 483 WP_011226072.1 8-oxo-dGTP diphosphatase Machinery gene
  J7U34_RS05650 (J7U34_05625) ftsX 1082674..1083603 (-) 930 WP_011681194.1 permease-like cell division protein FtsX -
  J7U34_RS05655 (J7U34_05630) ftsE 1083596..1084288 (-) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  J7U34_RS05665 (J7U34_05640) queG 1085527..1086645 (-) 1119 WP_011226076.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18869.36 Da        Isoelectric Point: 4.7200

>NTDB_id=484807 J7U34_RS05645 WP_011226072.1 1082036..1082518(-) (mutX) [Streptococcus thermophilus strain S24748]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=484807 J7U34_RS05645 WP_011226072.1 1082036..1082518(-) (mutX) [Streptococcus thermophilus strain S24748]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTCTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTTGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M461

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706