Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   J8G07_RS07810 Genome accession   NZ_CP072612
Coordinates   1542733..1544094 (+) Length   453 a.a.
NCBI ID   WP_032876597.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain G10     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1537733..1549094
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J8G07_RS07785 fumC 1537755..1539143 (+) 1389 WP_032876589.1 class II fumarate hydratase -
  J8G07_RS07790 - 1539180..1540055 (-) 876 WP_017418948.1 TetR/AcrR family transcriptional regulator -
  J8G07_RS07795 spxO 1540234..1540398 (+) 165 WP_007410067.1 anti-adapter protein SpxO -
  J8G07_RS07800 - 1540427..1541782 (-) 1356 WP_032876591.1 HAMP domain-containing sensor histidine kinase -
  J8G07_RS07805 - 1541779..1542456 (-) 678 WP_032876594.1 response regulator transcription factor -
  J8G07_RS07810 htrA 1542733..1544094 (+) 1362 WP_032876597.1 trypsin-like peptidase domain-containing protein Regulator
  J8G07_RS07815 - 1544141..1544605 (-) 465 WP_032876601.1 Dps family protein -
  J8G07_RS07820 - 1544695..1545537 (-) 843 WP_032876604.1 oxidoreductase -
  J8G07_RS07825 - 1545670..1547451 (+) 1782 WP_032876606.1 M3 family oligoendopeptidase -
  J8G07_RS07830 - 1547570..1548007 (+) 438 WP_032876609.1 YusW family protein -
  J8G07_RS07835 - 1548163..1548987 (+) 825 WP_012118397.1 ABC transporter ATP-binding protein -

Sequence


Protein


Download         Length: 453 a.a.        Molecular weight: 47986.45 Da        Isoelectric Point: 4.9330

>NTDB_id=484361 J8G07_RS07810 WP_032876597.1 1542733..1544094(+) (htrA) [Bacillus amyloliquefaciens strain G10]
MNDHRDDGRSRDQSDLSHTEQNRNEQQRISHQEPELLEEPVSKEAENETAAGTEFEKTAAVKKEKKRRAAWLSPVLGGII
GGGLVLGIVPNLPSEQHKTEAVSDTKQVQSSNFTSTPLKNTSSVADMVEDLEPAIVGVSNYQASQSSQFGLDGGSSSETE
SGTGSGVIFKKDGEKAYIITNNHVVEGANKLSVTLYNGKTETAKLVGKDAISDLAVLEISSSNVKKAASFGDSSKLRIAD
KVIAIGNPLGQQFSGTVTQGVISGLNRTVDADTSQGTVEMNVIQTDAAINPGNSGGPLINSSGQVIGINSMKVSENGVES
LGFAIPSNDVEPIVDQLLAKGKVERPFLGVQMIDMSQVPETYQENTLGLFGDQLSKGVYVKEVQSGSPAAKAGIKSNDVI
VQLNGKDVGSSADIRQILYNQLKIGDKTTVQVLRNGSKKTLNVTLTKQTESAS

Nucleotide


Download         Length: 1362 bp        

>NTDB_id=484361 J8G07_RS07810 WP_032876597.1 1542733..1544094(+) (htrA) [Bacillus amyloliquefaciens strain G10]
ATGAATGATCATCGAGATGACGGCAGAAGCCGCGATCAGTCAGATCTTTCACATACGGAACAAAACAGAAATGAACAGCA
GCGGATCAGCCATCAGGAGCCCGAGCTGCTTGAAGAGCCCGTCTCGAAAGAAGCGGAAAACGAGACGGCGGCCGGTACGG
AATTTGAAAAAACGGCTGCCGTGAAAAAAGAAAAAAAACGGAGAGCTGCTTGGCTGAGCCCGGTTTTAGGCGGCATTATC
GGCGGCGGCCTCGTGCTTGGCATTGTGCCGAACCTGCCGAGTGAGCAGCATAAGACAGAAGCCGTTTCTGATACGAAACA
AGTTCAGTCTTCGAATTTTACGTCAACGCCTTTGAAAAATACCTCAAGCGTAGCGGATATGGTGGAAGATTTGGAGCCCG
CGATTGTGGGAGTGTCCAACTACCAAGCTTCGCAAAGCAGCCAGTTCGGACTTGACGGCGGTTCAAGCTCTGAAACGGAG
AGCGGCACGGGATCAGGCGTCATCTTCAAAAAAGACGGCGAAAAAGCGTACATCATTACAAACAACCATGTCGTAGAAGG
GGCGAACAAACTGTCGGTCACTCTTTACAATGGGAAAACCGAAACGGCAAAGCTTGTCGGAAAGGATGCCATCAGTGACT
TGGCCGTATTGGAAATCAGCTCGTCCAATGTCAAAAAAGCGGCCAGCTTCGGGGATTCCTCCAAGCTCCGCATTGCCGAT
AAAGTGATTGCCATCGGCAACCCGCTCGGCCAGCAGTTTTCCGGCACCGTCACACAAGGTGTCATCAGCGGGCTGAACAG
AACGGTAGACGCCGATACATCCCAAGGCACGGTGGAAATGAACGTGATTCAGACGGATGCGGCGATTAACCCCGGAAACA
GCGGCGGCCCGTTAATCAACTCAAGCGGCCAGGTCATCGGGATCAACAGCATGAAAGTCAGTGAAAACGGCGTGGAGTCA
CTCGGCTTTGCCATTCCGAGCAATGATGTAGAACCGATAGTCGACCAGCTCCTTGCAAAAGGAAAAGTCGAGCGCCCATT
TTTAGGTGTGCAGATGATTGACATGTCGCAAGTGCCGGAAACCTATCAGGAAAACACGCTCGGACTGTTCGGCGACCAGC
TGTCTAAGGGTGTTTACGTAAAAGAAGTGCAATCCGGCTCACCGGCTGCGAAAGCGGGCATTAAATCCAATGACGTCATT
GTACAATTGAACGGCAAAGATGTCGGCAGCAGCGCCGATATCAGACAGATCCTATATAACCAGCTGAAAATCGGCGATAA
AACGACTGTTCAAGTGCTCAGAAACGGAAGCAAAAAGACGCTGAACGTCACATTAACGAAACAAACCGAAAGCGCAAGCT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

41.414

87.417

0.362