Detailed information NTG0484309

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: J8G07_RS01480
• Genome accession: NZ_CP072612
• Coordinates: 285689..286819 (-)
• Length: 376 a.a.
• NCBI ID: WP_032872953.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain G10
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 280689..291819

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J8G07_RS01460	-	281447..282724 (+)	1278	WP_087920751.1	Nramp family divalent metal transporter	-
J8G07_RS01465	-	282830..283096 (+)	267	WP_007609521.1	hypothetical protein	-
J8G07_RS01470	-	283320..283898 (+)	579	WP_171006740.1	hypothetical protein	-
J8G07_RS01475	-	283994..284551 (+)	558	WP_032872960.1	hypothetical protein	-
J8G07_RS19695	-	284565..284744 (+)	180	WP_032872957.1	hypothetical protein	-
J8G07_RS19430	-	284932..285162 (+)	231	WP_032872955.1	hypothetical protein	-
J8G07_RS19625	-	285555..285689 (-)	135	WP_255322095.1	hypothetical protein	-
J8G07_RS01480	rapC	285689..286819 (-)	1131	WP_032872953.1	Rap family tetratricopeptide repeat protein	Regulator
J8G07_RS01485	-	287483..287932 (+)	450	WP_049589365.1	hypothetical protein	-
J8G07_RS01490	-	287996..288553 (+)	558	WP_032872951.1	hypothetical protein	-
J8G07_RS19630	-	288589..289034 (-)	446	Protein_292	peptidoglycan-binding protein	-
J8G07_RS01505	-	289263..290984 (-)	1722	WP_014304370.1	pyruvate oxidase	-
J8G07_RS01510	-	291042..291486 (-)	445	Protein_294	NUDIX hydrolase	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44582.00 Da
• Isoelectric Point: 5.5572

>NTDB_id=484309 J8G07_RS01480 WP_032872953.1 285689..286819(-) (rapC) [Bacillus amyloliquefaciens strain G10]
MDQVLPSSQVGVKINEWYKMIRQFSVPDAEILKAEVEQEIEEMEEDQDLLVFYSLMCFRHQLMLDSLEPEDRYRDRPTVD
ELLEKIEKPQKRLTGLLKYYSLFFRGMYEFDHKEYVEAISYYRKAERELNAVSDEMEQAEFHYKIADAYYQIDQHFVSLN
HLKKAKQLFEKSQLYKVKVIGCNMMVGANMYDMYRLTEAESYYREALSIARGLDEEKVKRIIGVIFHNLGLVYLRGKNLI
AAEENFKKAIDVKEHIDTVYGVRSLYMMANVLYQCDKAKEARFFYETALNRARTSNEEEYLAKLKIINSLYEEYNETAVK
QSLGYLEGKRLWSDFAELTEKLGDFHFEKRNYAEGRNFLKKTIHAQTQILKVTEAI

Nucleotide

• Length: 1131 bp

>NTDB_id=484309 J8G07_RS01480 WP_032872953.1 285689..286819(-) (rapC) [Bacillus amyloliquefaciens strain G10]
ATGGATCAAGTTTTGCCGTCGTCCCAAGTTGGTGTCAAGATCAATGAATGGTACAAAATGATTCGCCAGTTCAGTGTGCC
TGATGCTGAGATTTTAAAGGCTGAAGTAGAACAGGAAATAGAGGAGATGGAAGAGGATCAGGATTTGCTTGTCTTTTATT
CATTGATGTGCTTTCGTCACCAATTGATGTTAGATTCCTTGGAGCCGGAAGACAGATATAGAGATCGCCCTACAGTCGAC
GAACTGCTTGAAAAAATAGAAAAACCACAAAAAAGACTTACAGGCCTCTTGAAATATTACTCATTGTTTTTTCGTGGAAT
GTATGAATTTGATCATAAAGAGTATGTTGAAGCGATAAGCTATTATCGCAAAGCAGAGAGAGAGTTGAATGCTGTATCAG
ATGAAATGGAGCAAGCTGAATTTCATTACAAAATAGCTGATGCCTATTATCAAATTGATCAGCACTTTGTTTCCCTCAAT
CATTTAAAAAAAGCCAAGCAATTGTTTGAAAAAAGTCAACTATACAAAGTGAAAGTGATTGGCTGTAATATGATGGTCGG
TGCTAACATGTACGATATGTACAGGCTGACGGAGGCAGAATCATATTATCGGGAAGCATTAAGTATCGCCCGTGGCTTGG
ATGAGGAAAAAGTGAAAAGAATTATCGGAGTGATCTTTCATAACTTAGGCTTAGTTTATTTAAGAGGGAAAAATTTGATT
GCTGCTGAAGAGAATTTCAAAAAGGCAATAGACGTGAAAGAACATATTGATACAGTGTATGGAGTGAGATCATTATATAT
GATGGCGAATGTCCTGTACCAATGTGATAAAGCCAAGGAAGCACGTTTCTTTTATGAAACGGCTCTAAATCGTGCTCGGA
CTTCTAATGAAGAAGAATATTTGGCTAAATTAAAAATCATTAATTCATTATACGAAGAATATAATGAAACAGCAGTGAAA
CAAAGCTTAGGCTACTTAGAAGGGAAACGCCTTTGGTCTGATTTCGCAGAGCTGACTGAAAAATTAGGTGACTTTCATTT
TGAGAAGAGAAACTATGCAGAGGGAAGAAACTTTTTAAAGAAAACCATACACGCCCAAACACAAATACTTAAGGTTACGG
AGGCTATATAA

Domains

Predicted by InterProScan.

• MalT-like TPR region (TPR_MalT) (145-296)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.534	99.202	0.372