Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   IC768_RS03340 Genome accession   NZ_CP061675
Coordinates   681280..685800 (+) Length   1506 a.a.
NCBI ID   WP_190981876.1    Uniprot ID   -
Organism   Acinetobacter seifertii strain AS17     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 676280..690800
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IC768_RS03315 (IC768_03315) - 676719..677357 (-) 639 WP_049064413.1 hypothetical protein -
  IC768_RS03320 (IC768_03320) pilG 677641..678024 (+) 384 WP_077168706.1 twitching motility response regulator PilG Regulator
  IC768_RS03325 (IC768_03325) - 678048..678410 (+) 363 WP_004705774.1 PleD family two-component system response regulator -
  IC768_RS03330 (IC768_03330) - 678468..679004 (+) 537 WP_004705775.1 chemotaxis protein CheW -
  IC768_RS03335 (IC768_03335) - 679051..681132 (+) 2082 WP_190981874.1 methyl-accepting chemotaxis protein -
  IC768_RS03340 (IC768_03340) chpA 681280..685800 (+) 4521 WP_190981876.1 hybrid sensor histidine kinase/response regulator Regulator
  IC768_RS03345 (IC768_03345) - 685797..686264 (+) 468 WP_190977788.1 hypothetical protein -
  IC768_RS03350 (IC768_03350) - 686466..687854 (+) 1389 WP_151792816.1 coproporphyrinogen-III oxidase family protein -
  IC768_RS03355 (IC768_03355) - 687866..688747 (+) 882 WP_151792817.1 alpha/beta fold hydrolase -
  IC768_RS03360 (IC768_03360) dapE 688884..690017 (-) 1134 WP_068936426.1 succinyl-diaminopimelate desuccinylase -
  IC768_RS03365 (IC768_03365) - 690143..690286 (-) 144 WP_002051109.1 entericidin A/B family lipoprotein -

Sequence


Protein


Download         Length: 1506 a.a.        Molecular weight: 171318.84 Da        Isoelectric Point: 4.3457

>NTDB_id=484040 IC768_RS03340 WP_190981876.1 681280..685800(+) (chpA) [Acinetobacter seifertii strain AS17]
MKEILKTLTEAMTLPEDSYSEQDAEFLEIFVEEIDEIFVDLQPLLNEWMQSANTATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLKLTPAIQGYVQLVFKFYFLKLVDNFKQKRAHAVDFRPLILLGQQLQQQQSLEPALEELLELS
NTLTAETMTGLELDYIEQDLLAEPIVEDVHTEIEINLNETLALFMEEAEEHLSTINQFLNQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEHLFKILLQEELSSNSDEILLLQEYRDFIGESLELLSSNSSNEQLEARLAQFNQSWDAYVEQ
HGDRTDPLMPSHGLVSQLLLLDVSELLDAELDFEKGIRNEFPGYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKDSYNV
LLDKPVLLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGIVKQHQSILEELKLYTLHTPSIQNDLPQQNFTFDEPLFNTEL
EPEVITVENLSDSADWTILSQSVQQDRQYISSVQVNRNFDPDLLDIFLEEADELLEGIDTDLNIWVGEQENFAALNNLMR
YLHTLKGGANMVQATYIGSITHELESIYERLIQKQLIATSPLIDFIRLIQDDLADRLQIMREKQLDYAAPYTINALKQAG
KNSNFQPVPEVEVFDTESEIFSEQEVVSQVLINEVPAETEVVVDELEAHHDQVFDTVVTELATPVEVITSVESSQENEAV
VDEEDITVVVEQTFLEEAAELLEMADVLLKQWFDQRTNRSILLQLQRAVHSLKGGARMVGLEAVYAIAYQLENTFEQFAL
HHFNSNIYDHLLESAIAWLKDAIFKHNYQHFDGLQQSLENIQFFETNIQIPAKLTKADLFSSEPVMTFIQGDGTEPPPMM
GVWEQTERLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLVEMELAIQRLADQLSRMEGELETQIIAKH
GIEHSRYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSHKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSRLLP
RLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRTQRQQANKPEAGRIELNIQRQGTDV
VVVFSDDGQGIDVEKVRQKALLAGLIKPEQHLEHQDILQLIFHPGLSTADQITQISGRGVGLDVVQSDIKALGGHVSVDS
VYGKGTTFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFESPKELFEYENKRYPLRYLSEFVGNQP
IPRLNGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFASIGAIAGATILGDGQVCLILDGQNIARQIQST
PRHKQLGEAVYRQRESDERRLVMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFE
VLNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVAFESEVKS

Nucleotide


Download         Length: 4521 bp        

>NTDB_id=484040 IC768_RS03340 WP_190981876.1 681280..685800(+) (chpA) [Acinetobacter seifertii strain AS17]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGACGCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAGATTTTTGTCGAAGAAATTGATGAAATTTTTGTTGATTTGCAGCCATTGTTGAATGAATGGATGCAGTCTGCAAATA
CTGCTACGCTCACTGAAATTCGCCGCCATTTTCATACCTTAAAAGGTTCGGGGAGAATGATTGGTGCTAAATCTTCGGCC
GAGCTTGCTTGGACAGTTGAAGATACGCTCAATCGAGTAATCAATCAAAGCCTTAAGCTGACTCCAGCTATTCAAGGCTA
TGTTCAGTTAGTGTTTAAGTTCTATTTCCTTAAATTAGTAGATAACTTTAAGCAAAAACGAGCACATGCAGTAGATTTTA
GACCGCTTATTTTATTAGGCCAACAACTACAACAACAGCAAAGTTTAGAACCTGCTTTAGAAGAGCTTTTAGAACTTTCA
AATACGCTTACTGCCGAAACAATGACTGGGCTTGAGCTAGACTATATTGAGCAAGATTTATTGGCTGAGCCAATTGTTGA
AGATGTACATACTGAAATTGAAATAAATCTAAATGAAACTTTAGCCTTGTTTATGGAAGAGGCGGAAGAGCATTTATCGA
CAATCAATCAGTTCTTAAATCAAGAACTACATCAGTATGATAGCTACAATGCTTTAATACGTGCTCTACATACTTTGCGT
GGCAGTTCTGCAATGGCGCAGGTCGAAACAATTTTTGAAGCCAGTACTAAAGTTGAGCACTTATTTAAAATCTTATTGCA
AGAGGAGCTTTCTTCTAATTCAGATGAGATTTTATTATTACAAGAATATCGTGATTTTATTGGCGAGAGCTTAGAACTGC
TATCTAGCAATAGTTCAAATGAACAGCTTGAAGCGAGATTGGCGCAGTTTAATCAGTCATGGGATGCCTACGTGGAGCAA
CATGGTGATCGAACTGATCCATTAATGCCTTCACATGGTTTGGTGTCACAATTATTGCTGCTAGATGTTTCTGAGTTACT
AGATGCAGAATTAGATTTTGAGAAAGGAATTCGTAACGAGTTTCCTGGTTATCTTGAACGTCTAAGTGAACAGGCTGATC
TGTTGCTACAGCATACTCACTCTCAAGCAATGCTTGGTTTGCATGAATATACAAGCCAATTGAAAGACAGCTATAATGTA
TTGCTTGATAAACCTGTCTTGTTGCAATCAGACTATATTTTTGAAATTTATCAAAAAGCGCATCAACAACTTATTCAATT
GTTCGATGCTTTAGCTGCTGGTCAGCGAGTGGGTATTGTTAAGCAACATCAAAGTATTCTAGAAGAATTAAAACTTTATA
CGTTACATACGCCGAGTATTCAAAACGATTTACCTCAGCAGAATTTTACTTTTGATGAGCCACTATTCAATACTGAACTA
GAACCAGAAGTTATTACGGTAGAGAATTTATCAGATTCCGCCGACTGGACCATATTAAGCCAGAGTGTACAGCAAGATCG
TCAGTATATTTCATCTGTACAGGTAAATCGAAACTTTGATCCTGATCTTTTGGACATTTTCCTTGAAGAAGCTGATGAGC
TACTTGAGGGGATTGATACTGATCTCAATATATGGGTAGGTGAGCAAGAAAACTTTGCAGCTCTGAACAACTTAATGCGC
TATTTGCATACCTTGAAAGGGGGAGCAAATATGGTTCAGGCGACTTATATCGGTTCGATTACCCATGAATTAGAAAGCAT
ATATGAACGTTTAATTCAAAAGCAGTTAATTGCAACCTCACCTCTAATTGATTTTATTCGTTTGATTCAAGATGATTTGG
CCGATCGTCTACAAATCATGCGTGAAAAACAGCTAGATTATGCAGCTCCTTACACAATTAATGCGTTAAAACAAGCGGGT
AAAAACTCTAACTTCCAACCTGTGCCTGAGGTTGAAGTATTTGATACTGAAAGTGAGATATTCTCTGAACAAGAGGTGGT
GTCTCAAGTATTAATAAATGAGGTACCAGCGGAAACAGAAGTTGTTGTTGACGAATTAGAAGCTCATCACGATCAAGTAT
TTGATACCGTTGTTACTGAATTGGCTACGCCAGTTGAAGTAATAACATCAGTTGAATCCTCGCAAGAGAATGAAGCTGTA
GTTGACGAAGAAGATATTACAGTTGTTGTTGAGCAGACATTCCTAGAAGAAGCTGCTGAATTGTTAGAAATGGCTGATGT
GCTATTGAAACAATGGTTTGATCAGCGTACGAACCGTAGTATTTTGCTTCAGTTACAAAGAGCCGTGCACAGTTTGAAGG
GTGGTGCACGCATGGTCGGTTTAGAGGCCGTATATGCAATTGCTTATCAACTGGAAAATACTTTTGAACAGTTTGCACTG
CATCACTTCAACTCGAATATTTATGACCATCTGCTCGAAAGTGCAATTGCATGGCTAAAAGATGCAATTTTCAAGCACAA
CTACCAGCATTTCGATGGACTACAACAAAGTTTAGAAAATATTCAATTCTTTGAAACGAATATCCAAATTCCAGCGAAGT
TAACGAAAGCTGATTTGTTTAGCTCAGAACCTGTGATGACCTTTATACAAGGTGATGGTACCGAACCACCACCAATGATG
GGAGTATGGGAGCAAACAGAACGTCTGGATCAAAATAATGAAATGATCCGAGTTTCAGCAGATTTAATTGAGAAGATGAT
TGATTTATCTGGTGAAAATTCGATTAACCGTTCGCGAATTGAAATGGATCTAAGTCAGTTTGGTCATACATTGGTTGAAA
TGGAATTGGCTATTCAACGACTTGCCGATCAGTTAAGTCGAATGGAAGGCGAATTAGAAACACAAATTATTGCCAAACAT
GGTATTGAGCATTCTCGTTATACCGACTTTGACCCTTTAGAGATGGACCAATATTCATCTTTAAATCAGTTATCGAAATC
TCTTGCTGAATCTGCATCGGACTTAGTCGACTTTAAAAATACGTTGTCTCACAAGATCAGAGATACAGAAAGTCTGCTTT
TACAACAGTCACGAATTCAGGCAGAAATTCAAGAAGGTTTGATGCGAACACGATTAGTTCCATTTTCACGGTTACTACCA
CGTTTACAGCGAATTGTTCGTCAGACCTCTACTGCATTGAACAGACCTGCTGAGCTTTTTGTAAATAATACTGAAGGTGA
ACTAGACCGTAATATTTTAGAACGCTTGGTAACACCGCTTGAGCATATGCTCAGAAACGCAATTGACCATGGCTTAGAAG
ACAGAACACAACGTCAGCAAGCTAATAAACCTGAAGCTGGGCGTATTGAACTTAATATTCAACGTCAAGGTACAGATGTG
GTCGTTGTCTTTAGTGATGATGGACAAGGTATTGATGTAGAAAAAGTACGTCAAAAAGCACTGCTTGCGGGTCTGATCAA
ACCGGAACAGCACTTGGAACACCAAGATATTTTACAACTGATTTTCCATCCAGGTTTAAGTACAGCAGATCAGATTACTC
AAATCTCTGGGCGTGGTGTTGGACTCGATGTTGTACAAAGCGACATTAAGGCTCTAGGTGGACATGTTAGCGTAGACTCT
GTTTATGGTAAGGGAACAACATTTACTATTCGTGTACCGACTACGGTAGCTGTAAGTGATGCCTTAATGGTGAAAGTGGC
AGATCAGCAATTTGCGATTCCACTTGCTCAAATCGACCGAATTGTTCGAGTTTCACCAGCTTCTTTAGAACAGTATTTTG
AAAGTCCTAAAGAGCTATTCGAGTATGAAAATAAACGTTATCCATTACGTTATCTTTCAGAATTTGTGGGTAATCAACCA
ATACCACGTCTAAACGGCATGATGTATTCATTACCTGTCTTAATGATTAAAGCTAACAATGGCCAAACTGTGGCTTTACT
TGTTGACCAGTTAATTGGTTCTCGAGCACAAATTGTAGTGAAACCAATTGGCCAACAGTTCGCTAGCATTGGGGCAATTG
CAGGTGCGACTATTTTAGGTGATGGACAAGTTTGCTTAATTTTAGACGGACAAAATATTGCGCGACAAATTCAGTCTACT
CCGCGTCATAAACAGCTTGGTGAAGCAGTATATAGACAACGAGAATCTGACGAGCGCCGTCTCGTTATGATTGTCGATGA
CTCGGTAACTGTACGTAAGGTAACGTCTCGATTACTTGAACGCCAAGGCTACGATGTTGTTACGGCCAAAGATGGTGTGG
ATGCCATAGAGCAGCTAGAAAACATTAAGCCAGATCTAATGCTACTTGATATTGAAATGCCGCGTATGGATGGTTTCGAA
GTATTGAATCTTGTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACGTCCCGAACAGGTGAAAAACA
TCGAGAACGAGCATTCTCGTTAGGTGTAAGTCAATATATGGGTAAACCTTTCCAAGAGGAAGAATTACTAGAGAATATCG
ATGCTTTACTTGTAGCGTTTGAAAGTGAGGTCAAATCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

91.175

100

0.912