Detailed information NTG0484007

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: IC769_RS10150
• Genome accession: NZ_CP061672
• Coordinates: 2168924..2169739 (-)
• Length: 271 a.a.
• NCBI ID: WP_191108255.1
• Uniprot ID: -
• Organism: Acinetobacter seifertii strain AS23
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2163924..2174739

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IC769_RS10120 (IC769_10120)	-	2164235..2164675 (-)	441	WP_191108252.1	SRPBCC family protein	-
IC769_RS10125 (IC769_10125)	tadA	2164745..2165246 (-)	502	Protein_1995	tRNA adenosine(34) deaminase TadA	-
IC769_RS10130 (IC769_10130)	-	2165254..2166378 (-)	1125	WP_019458997.1	enoyl-CoA hydratase/isomerase family protein	-
IC769_RS10135 (IC769_10135)	ung	2166375..2167088 (-)	714	WP_191108253.1	uracil-DNA glycosylase	-
IC769_RS10140 (IC769_10140)	-	2167139..2167735 (-)	597	WP_039251397.1	6-carboxytetrahydropterin synthase	-
IC769_RS10145 (IC769_10145)	gspK	2167965..2168924 (-)	960	WP_191108254.1	type II secretion system minor pseudopilin GspK	-
IC769_RS10150 (IC769_10150)	xcpW	2168924..2169739 (-)	816	WP_191108255.1	type II secretion system minor pseudopilin GspJ	Machinery gene
IC769_RS10155 (IC769_10155)	xcpV	2169739..2170119 (-)	381	WP_191108256.1	type II secretion system minor pseudopilin GspI	Machinery gene
IC769_RS10160 (IC769_10160)	-	2170109..2170660 (-)	552	WP_004701984.1	type II secretion system protein	-
IC769_RS10165 (IC769_10165)	-	2170670..2171278 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
IC769_RS10170 (IC769_10170)	-	2171316..2172089 (-)	774	WP_191108257.1	TatD family hydrolase	-
IC769_RS10175 (IC769_10175)	-	2172107..2172448 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
IC769_RS10180 (IC769_10180)	-	2172461..2173441 (-)	981	WP_191108258.1	DNA polymerase III subunit delta'	-
IC769_RS10185 (IC769_10185)	kdsB	2173453..2174214 (-)	762	WP_191108259.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30492.70 Da
• Isoelectric Point: 9.2332

>NTDB_id=484007 IC769_RS10150 WP_191108255.1 2168924..2169739(-) (xcpW) [Acinetobacter seifertii strain AS23]
MIKNKHFCNRSKISRLAAGSDVITTDCSEHSSSSYARTKRCFSDSCTRNSVSHLAARSSSARLARASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQTLRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
QGLSPFERIEYRYDADQKKLYRLKYTNLNTSNNEQPLSSTLLSQVDQYQVMVLTPQEVTKWPEVNIDPTKPNELKKLPKG
IKIQVTVAGVSYEWIYSLNQSNLALSQQGGS

Nucleotide

• Length: 816 bp

>NTDB_id=484007 IC769_RS10150 WP_191108255.1 2168924..2169739(-) (xcpW) [Acinetobacter seifertii strain AS23]
ATGATAAAAAATAAGCACTTTTGCAACCGAAGCAAAATTTCACGTCTTGCAGCTGGATCAGACGTTATAACGACTGACTG
CTCAGAGCATAGCTCTTCGTCTTACGCTCGGACAAAGCGCTGTTTTAGTGATTCTTGCACTCGAAACTCTGTTTCTCATC
TTGCGGCGCGATCGAGCAGTGCTCGATTAGCTCGCGCCTCAGGATTTACGTTGGTTGAGTTATTGGTTGCGATTGCTATT
TTCGCGGTTTTATCTTTATTGGGGTGGAAAATATTCGATTATTTGCTCAAGGTGCGTGATCGTAACGCTGAACATGAAGT
GCATTTATTTGAATTACAAGATGCTTATCAACAAACTCTTCGTGATACTCTGCAAATTATTCCTTTATCTGCAAATCAAG
GTGGGCAACTTCATCCAGCTTTAGAAATCGATAATCAAATTTTACGTTTTAGCAAAGCAGGTGTAACTGATCCTTTAAAA
CAGGGTTTGTCACCATTTGAACGAATTGAATATCGTTATGATGCTGACCAAAAAAAACTTTATCGTCTTAAATATACAAA
TTTAAATACTTCGAATAACGAGCAACCTTTATCAAGTACCTTACTAAGTCAAGTTGACCAATATCAGGTTATGGTCTTAA
CTCCGCAAGAAGTAACAAAATGGCCCGAAGTTAATATTGATCCAACAAAACCTAACGAGTTAAAAAAATTACCGAAAGGA
ATAAAAATCCAAGTTACAGTAGCGGGAGTAAGTTATGAGTGGATCTATAGCTTGAATCAAAGCAATTTAGCACTTTCTCA
GCAAGGTGGTTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	93.304	82.657	0.771